Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03125 ATGCCCCTATCTCCTTTTTTCATGGCTTCTTCAATCCCTCATCACTATTATTCAAACTACACTTCTGATCATTTTACCACACAACAAGGTTTGTCTTCACATAATAATAATAACATTATTAATACCTCAATTTTGGACAATACTATGATGTGGGGTTGTCAAGAAAATTTAATGCCTGTTTTTGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATACTATGTCTTCCTCTGGTGCTTGGATACATCCGAATTTCGTCGAGCAACAAGATTTTGCGGTTCCGGCTTTGTTGTCGGATTGTAAATTGGGATTTTATGGTGGAGGGATTCCGAATTTTAATGGAAGATATAATAATCAGCCACCTATTGGTCATGAGTTTGTAGAAGATCAATGTTGTGGTTTTGTTGAAGATATTAAACCACCTCCACCTTATCCTAATGTTGCAAGAGAAAATTGGGGGATACAAAGTAATCAAATAACAACGGTTGAAGAACCAAACATAAAGTATGCATGTCGGAAAACTTTAGCTGATAGAAGAGTGAGAGTGAGAGGAAGGTTTGCAAGGAACAATGAGATATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATGATCACATCAATGATGACTTTTATGGTTCTGATTCATTCCAGTTCCAGTTAAAGAATGAGGAGGAGGACTGGCTTCAAGAGGCTATGGCAAGTTTGGTGTATTTATCTCATTCATCACCGGATGATATGTGA 768 0.3685 MPLSPFFMASSIPHHYYSNYTSDHFTTQQGLSSHNNNNIINTSILDNTMMWGCQENLMPVFDNYGAFDQIVSLDCDTMSSSGAWIHPNFVEQQDFAVPALLSDCKLGFYGGGIPNFNGRYNNQPPIGHEFVEDQCCGFVEDIKPPPPYPNVARENWGIQSNQITTVEEPNIKYACRKTLADRRVRVRGRFARNNEICEEDHMATKKLENHHDDHINDDFYGSDSFQFQLKNEEEDWLQEAMASLVYLSHSSPDDM 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03125 255 ProSiteProfiles CCT domain profile. 151 193 IPR010402 GO:0005515
Trre11g03125 255 Pfam CCT motif 169 193 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03125 Trre-Chr11 42463721 42465845 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre11g03125 CCT 3e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03125 - - cam:101492034 350.517