Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03084 ATGGCGGCCAAATCTTGTCGCATAGGTCAAACACTTTCAAGATACATTAAAGAAGCTACTAGAGGATGTGCTTTTAATGTTGTTACTAAGGGTTCTTTGGATGCCTTGGAAAAAAAGAGCACGGCTTTGGAGCTTGAGCTTGTGAATGCTCAAAAAGACCATAGTGAAACCATTCAGAAAATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACATAATTTGAAAAGTCCTGAAGAAAAACTGTTGAGTTTGGAGAAGGAAAATCACGTCCTTTGTCAGAAAGTCTTAAGTGTATCTCCGAAGAGTAATCGTTCAGATTTTGCAAAGTCGTCATTAGAAGGTTTTTTGGATGCCTTGGAAAAGAAGAGCACGGCTTTGGAGCTTGAGATTGTGAATGCTCAAAAAGACCATAGTGAAACCATTCAGAAAATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACATAATTTGAAAAGTCCTGAAGAAAAACTGTTGAGTTTGGAGAAGGAAAATCACGTCCTTTGTCAGAAAGTCTTAAGTGTATCTCCGAAGAGTAATCGTTCAGATTTTGCAAAGTCGTCATTAGAAGGTTTTTTGGATGCCTTGGAAAAGAAGAGCACGGCTTTGGAGCTTGAGATTGTGAATGCTCAAAAAGACCATAGTGAAACCATTCAGAAAATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACATAATTTGAAAAGTCCTGAAGAAAAACTGTTGAGTTTGGAGAAGGAAAATCACGTCCTTTGTCAGAAAGTCTTAAGTGTATCTTCGAAGAGTAATCGTTCAGATTTTGCAAAGTCGTCATTAGAAGGTTTTTTGGATGCCTTGGAAAAGAAGAGCACGGCTTTGGAGCTTGAGATTGTGAATGCTCAAAAAGACCATAGTGAAACCATTCAGAAAATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACATAATTTGAAAAGTCCTGAAGAAAAACTGTTCAGTTTGGAGAAGGAAAATCACGTCCTTTGTCAGAAAGTCTTAAGTGTATCTCCGAAGAGTAATCGTTCAGATTTTGCAAAGTCGTCATTAGAAGGTTTTTTGGATGCCTTGGAAAAGAAGAGCACGGCTTTGGAGCTTGAGCTTGTGAATGCTCAAAAAGACCATAGTGAAACCATTCAGAAAATGAAGGAGTTTGAACAGAAGAGTTCTCAACTTGCACATAATTTGAAAAGTCCTGAAGAAAAACTCTTGAGTTTGGAGAAGGAAAATCACGTCCTTTGTCAGAAAGTCTTAAGTGTATCTCCGAAGAGTAATCGTCCAGATTTTGCAAAGTCGTCATTAGAAAATTTACATGTTGTACCATGTGCTGATCTTCCTGCGTCAGTAGACTGGACGTGTAGTGGGGTTCTGTCGCCCGTAAGATCTCAAGGCAAAGTAAGTTCATGTTGGGCTTTTGTTACTGCTGAGATGATAGAAACAGGTCGATAA 1494 0.3882 MAAKSCRIGQTLSRYIKEATRGCAFNVVTKGSLDALEKKSTALELELVNAQKDHSETIQKMKEFEQKSSQLAHNLKSPEEKLLSLEKENHVLCQKVLSVSPKSNRSDFAKSSLEGFLDALEKKSTALELEIVNAQKDHSETIQKMKEFEQKSSQLAHNLKSPEEKLLSLEKENHVLCQKVLSVSPKSNRSDFAKSSLEGFLDALEKKSTALELEIVNAQKDHSETIQKMKEFEQKSSQLAHNLKSPEEKLLSLEKENHVLCQKVLSVSSKSNRSDFAKSSLEGFLDALEKKSTALELEIVNAQKDHSETIQKMKEFEQKSSQLAHNLKSPEEKLFSLEKENHVLCQKVLSVSPKSNRSDFAKSSLEGFLDALEKKSTALELELVNAQKDHSETIQKMKEFEQKSSQLAHNLKSPEEKLLSLEKENHVLCQKVLSVSPKSNRPDFAKSSLENLHVVPCADLPASVDWTCSGVLSPVRSQGKVSSCWAFVTAEMIETGR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03084 497 Gene3D Cysteine proteinases 366 496 - -
Trre11g03084 497 Coils Coil 285 319 - -
Trre11g03084 497 Coils Coil 201 235 - -
Trre11g03084 497 Coils Coil 117 151 - -
Trre11g03084 497 Pfam Papain family cysteine protease 460 494 IPR000668 GO:0006508|GO:0008234
Trre11g03084 497 Coils Coil 33 67 - -
Trre11g03084 497 Coils Coil 369 403 - -
Trre11g03084 497 SUPERFAMILY Cysteine proteinases 450 495 IPR038765 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03084 369 437 Myosins gene family AT4G33200 49.275 8.01e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03084 K10357 - gmx:100796413 115.546