Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g02970 | ATGGCATTGGAGTTAAGTTTCCATTCAAAAAATATGTTTTCTTACTTGTACATGATTCTATTGTTTAACTTTGGAATCTTTCTTGTAAGTTCAATCAATGAAGAGGGTTCAAATCTTTTGAAGTTCAAAAGATCACTTTTGGATTCAAATCATAATCTTGTTAACTGGAATGTTTCTGATTTAACTCCATGCAATTGGACTGGTGTTTATTGTGTTGATTCAATAGTAACTTCTGTTAATCTTTACCACCTTAATCTCTCTGGTAATTTGTCTCCTAAAATCTGTAATCTTCCATGGTTAGTTGAGTTGAATGTCTCTAAAAACTTCATCTCTGGTCCAATTCCTGATGGTTTTGTTAACTGTGATAAACTCGAGGTTTTAGACCTTTGTACAAATAGGTTTCATGGACCATTTTTGACTCCTATTTGGAAAATCAAAACACTTAGGAAGCTTTACCTTTGTGAAAATTACATGTATGGTGAAATACCAGAAGAGATTGGTAAATTAACATCACTTGAAGAGTTAGTGATTTATAGCAACAACTTAACAGGAAGCATTCCTGGATCGATCAGTAAGTTGAAACGGCTTAGAGTTATTCGGGCAGGTTTGAATGGTCTCTCAGGAAAATTACCTTCAGAAATCAGTGAGTGTGAAAGCTTAGAGACATTAGGGTTAGCACAGAATCAGTTAGTAGGTTCTATTCCAAAAGAGCTTCAAAAGCTTCAGAACCTTACTAATTTGATTCTATGGCAAAACTCTTTTTCTGGTGAGCTTCCTCCTGAGATTGGAAATATTAGTAGCCTTGAATTAATTGCTTTGCATCAAAATTCATTAATTGGTGATGTCCCGAAAGAGCTCGGGAGGTTACCGTGGTTGAAGAGGTTGTACATGTACACAAACCAGTTGAATGGAACAATTCCACCTGAGTTAGGAAACTGTACTAATGCTATTGAGATTGATCTATCTGAAAACCATTTGATTGGTATCATTCCAAAAGAGTTAGGTCAAATCTCTAATCTTACCTTGCTTCACCTATTTGAAAACAATTTGCAGGGTCATATTCCAAAGGAGCTTGGAAATTTGAGGCTGCTGAAGAATTTAGATTTGTCGTTGAACAACTTAACAGGTATAATTCCGTTTGAGTTTCAAAATCTTAAACTCATGGAGGATTTGCAGCTATTTGATAATCAACTTGAAGGTGTGATTCCACCTCATCTTGGAGCATTTAGAAACCTTACTATTCTTGATATATCTTCAAATAATCTTGTCGGTATGATACCAAACCGTCTTTGTGAATATCAGAAGCTTCAATTCCTTAGCCTTGGATCAAATAGGCTCTTTGGAAATATTCCTTATAGATTGAAAACTTGTAAGTCACTTGTGCAGTTAATGCTTGGGGATAATCTTTTGACAGGAAGTTTACCTGTTGAATTGTATGAACTTAATAATCTTACCGCGCTCGAGCTTCATCAGAACAGATTCTCCGGGCTGATTAGCCCTGGAATTGGTAAACTTGGGAATCTAGAGAGGCTTCACTTGTCAGATAATTATTTTTCAGGTCATCTACCTTCTGAGATTGGAAATTTGTCAAGCCTTGTAACATTCAATGTTTCGTCTAACCGTTTCGGTGGAAGTATTCCACACGAGTTAGGAAACTGTGTGAATCTGCAGAGACTTGATCTCAGCAGGAATAAGTTTACTGGTATGCTTCCAAGTTCAATTGGAAATCTTGTGAATTTGGAGCTACTAAAGGTTTCTGATAATATGCTTTCTGGAGAAATACCGGGCACTTTGGGGGACCTTATTCGTCTAACCGATTTGGAGCTCGGTGGAAATCGGTTTTCAGGAAGCATCCCTTTTCATTTTGGAAGACTTTCTTCTCTTCAGATAGCACTAAACTTGAGTCACAACAATCTTTCTGGTACAATTCCTGATAGCTTAGGGAGCTTGCAAATGCTAGAATCACTTTACTTAAATGATAATCAACTTGTCGGCGAAATTCCTTCATCAATTGGTGACTTGCTTAGTCTTTTAGTATGCAATGTATCTAACAATAAGCTGATAGGAACTGTTCCTGACACAACCACATTTAGAAAGATGGATTTAACAAATTTTGCCGGGAACAACGGTTTGTGCCGTGAAGGTACTAATCACTGCCATCCATCTTTAGCTTCATCTCATCATGCAAAGCCGATGAAAGACGGTTTATCAAGGGAACAGATTGTGAGTATTGTCTCTGGTGTGGTTGGTTTTGTGTCTCTGATTTTCATAGTTTGTATATGTTGGACTATGATGAGACGCCGCCGCAGCGATTCTTTTGTTTCGATTGAAGAACAAACAAAGCCTCATGTTCTAGATAATAGCTATTACTTTCCAAAAGAAGGCTTCACTTACAATGATCTCTTGGAAGCTACTGGGAATTTTTCAGAAAGTGAAGTTATAGGAAGAGGAGCTTGTGGAACTGTCTACAGAGCTGTTATGAATGATGGTGAAGTTATTGCTGTCAAGAAACTGAATACACGCGGAGGAGAAGGAACAAGCGTCGACCGAAGCTTCCTCGCAGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGCATGGATTTTGTTATCATCAGGATTCTAATCTTCTATTGTATCAATACATGGAAAATGGAAGCCTTGGTGAAAAACTTCATAGTTCAAGTTCAAAAACATGTGAACTGGATTGGAACATTAGATATAGAATAGCTCTAGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAACCTCAAATCATTCATCGCGATATCAAGTCGAACAATATTTTGCTTGATCAAAGTTTTCGGGCTCATGTTGGAGACTTTGGATTGGCAAAGTTGATTGATTTTTCATTATCAAAATCCATGTCTGCTGTTGCTGGATCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAAAAATGTGACATCTATAGTTTTGGGGTAGTTTTGCTGGAACTAGTTACCGGGAAGTCACCAGTTCAACCATTGGAACAAGGTGGTGATTTAGTTAACTGGGTGAGAAGATCAATTCAAGCATCAGTGCCTACATCTGAATTATTTGATAAGAGATTGGATTTGAGTGAACAAAAAACTGTTGAAGAAATGTCTCTTATTCTTAAAATTGCACTGTTTTGCACCAGTTCATTTCCACTTAATAGGCCTACAATGAGAGAGGTAATTGCAATGTTGATTGATGCTAGGGAATATGTCAACCAATCACCAACCTCTCCTTCATCTGAATCTCCACTTGATGAAGATAAAAGTTCTTCTTCAAAAGGTTAG | 3342 | 0.374 | MALELSFHSKNMFSYLYMILLFNFGIFLVSSINEEGSNLLKFKRSLLDSNHNLVNWNVSDLTPCNWTGVYCVDSIVTSVNLYHLNLSGNLSPKICNLPWLVELNVSKNFISGPIPDGFVNCDKLEVLDLCTNRFHGPFLTPIWKIKTLRKLYLCENYMYGEIPEEIGKLTSLEELVIYSNNLTGSIPGSISKLKRLRVIRAGLNGLSGKLPSEISECESLETLGLAQNQLVGSIPKELQKLQNLTNLILWQNSFSGELPPEIGNISSLELIALHQNSLIGDVPKELGRLPWLKRLYMYTNQLNGTIPPELGNCTNAIEIDLSENHLIGIIPKELGQISNLTLLHLFENNLQGHIPKELGNLRLLKNLDLSLNNLTGIIPFEFQNLKLMEDLQLFDNQLEGVIPPHLGAFRNLTILDISSNNLVGMIPNRLCEYQKLQFLSLGSNRLFGNIPYRLKTCKSLVQLMLGDNLLTGSLPVELYELNNLTALELHQNRFSGLISPGIGKLGNLERLHLSDNYFSGHLPSEIGNLSSLVTFNVSSNRFGGSIPHELGNCVNLQRLDLSRNKFTGMLPSSIGNLVNLELLKVSDNMLSGEIPGTLGDLIRLTDLELGGNRFSGSIPFHFGRLSSLQIALNLSHNNLSGTIPDSLGSLQMLESLYLNDNQLVGEIPSSIGDLLSLLVCNVSNNKLIGTVPDTTTFRKMDLTNFAGNNGLCREGTNHCHPSLASSHHAKPMKDGLSREQIVSIVSGVVGFVSLIFIVCICWTMMRRRRSDSFVSIEEQTKPHVLDNSYYFPKEGFTYNDLLEATGNFSESEVIGRGACGTVYRAVMNDGEVIAVKKLNTRGGEGTSVDRSFLAEISTLGKIRHRNIVKLHGFCYHQDSNLLLYQYMENGSLGEKLHSSSSKTCELDWNIRYRIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDQSFRAHVGDFGLAKLIDFSLSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGKSPVQPLEQGGDLVNWVRRSIQASVPTSELFDKRLDLSEQKTVEEMSLILKIALFCTSSFPLNRPTMREVIAMLIDAREYVNQSPTSPSSESPLDEDKSSSSKG | 1113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g02970 | 1113 | Gene3D | Ribonuclease Inhibitor | 31 | 191 | IPR032675 | - | |
Trre11g02970 | 1113 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 887 | 1100 | - | - | |
Trre11g02970 | 1113 | Pfam | Leucine rich repeat | 555 | 614 | IPR001611 | GO:0005515 | |
Trre11g02970 | 1113 | Pfam | Protein kinase domain | 809 | 1080 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g02970 | 1113 | Gene3D | Ribonuclease Inhibitor | 192 | 267 | IPR032675 | - | |
Trre11g02970 | 1113 | Gene3D | Ribonuclease Inhibitor | 271 | 384 | IPR032675 | - | |
Trre11g02970 | 1113 | FunFam | Predicted protein | 186 | 282 | - | - | |
Trre11g02970 | 1113 | ProSiteProfiles | Leucine-rich repeat profile. | 363 | 384 | IPR001611 | GO:0005515 | |
Trre11g02970 | 1113 | SUPERFAMILY | RNI-like | 252 | 567 | - | - | |
Trre11g02970 | 1113 | ProSiteProfiles | Leucine-rich repeat profile. | 80 | 101 | IPR001611 | GO:0005515 | |
Trre11g02970 | 1113 | Pfam | Leucine rich repeat N-terminal domain | 33 | 71 | IPR013210 | - | |
Trre11g02970 | 1113 | FunFam | Probable leucine-rich repeat receptor-like protein kinase At2g33170 | 32 | 185 | - | - | |
Trre11g02970 | 1113 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 333 | 1084 | - | - | |
Trre11g02970 | 1113 | SMART | serkin_6 | 808 | 1090 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g02970 | 1113 | Gene3D | Phosphorylase Kinase; domain 1 | 770 | 886 | - | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 650 | 674 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 361 | 384 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 289 | 313 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 169 | 193 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 409 | 433 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 505 | 528 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 577 | 601 | IPR003591 | - | |
Trre11g02970 | 1113 | SMART | LRR_typ_2 | 554 | 576 | IPR003591 | - | |
Trre11g02970 | 1113 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 773 | 886 | - | - | |
Trre11g02970 | 1113 | Gene3D | Transferase(Phosphotransferase) domain 1 | 887 | 1105 | - | - | |
Trre11g02970 | 1113 | Gene3D | Ribonuclease Inhibitor | 385 | 727 | IPR032675 | - | |
Trre11g02970 | 1113 | MobiDBLite | consensus disorder prediction | 1091 | 1113 | - | - | |
Trre11g02970 | 1113 | SUPERFAMILY | Protein kinase-like (PK-like) | 784 | 1083 | IPR011009 | - | |
Trre11g02970 | 1113 | SUPERFAMILY | L domain-like | 494 | 713 | - | - | |
Trre11g02970 | 1113 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 933 | 945 | IPR008271 | GO:0004672|GO:0006468 | |
Trre11g02970 | 1113 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B | 283 | 385 | - | - | |
Trre11g02970 | 1113 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 410 | 723 | - | - | |
Trre11g02970 | 1113 | SUPERFAMILY | L domain-like | 35 | 302 | - | - | |
Trre11g02970 | 1113 | ProSiteProfiles | Protein kinase domain profile. | 808 | 1090 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g02970 | Trre-Chr11 | 39810022 | 39814224 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g02970 | 57 | 1087 | Receptor kinase-like Gene Family | AT1G73080 | 38.904 | 0.0 | 656 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre11g02970 | Pkinase | 6.2e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g02970 | - | - | gmx:100818311 | 1790.78 |