Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02947 ATGGCTGATGAAGTGATTCTGCTAGATTTTTGGCCAAGTCCATTTGCTATGAGAATCAGAATAGCACTTGCTGAAAAGGGTATCAAATATGAGACCAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTGTTGTTACAAATGAACCCTGTTCATAAGAAAATCCCTGTTCTTATTCACAATGGTAAACCTATTGCTGAATCTCTAATTGCTGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTTCTCTTTTACCTTCTGATCCTTATCAGAGATCACAAGCTCGATTCTGGGCTGATTTTGTTGACAAAAAGATATTTGAAGTTGGAAGGAAGCTTTTGGCCAAAAAAGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGAAGCCATCAAATTGTTGGAGCAAGAGTTGGGAGACAGGACTTATTTTGGAGGAGACAAGCTTGGTTATGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAGACTTTTGGCAACTTCAATGTAGAGAAGGAAAGCCCTACGTTCATTGCTTGGGCCAAGAGATGCATCAAGATTGAAAGTGTCTCCAAGTCTCTTCCTGATCAGGATAAGCTATATGGATTCATTGTAGAGTTCAGGAAGGTGATAAGCATTGAATAG 660 0.3894 MADEVILLDFWPSPFAMRIRIALAEKGIKYETKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDKSSLLPSDPYQRSQARFWADFVDKKIFEVGRKLLAKKGEEQEAAKKEFIEAIKLLEQELGDRTYFGGDKLGYVDVALIPFYTWFKGYETFGNFNVEKESPTFIAWAKRCIKIESVSKSLPDQDKLYGFIVEFRKVISIE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02947 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Trre11g02947 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Trre11g02947 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Trre11g02947 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Trre11g02947 219 FunFam Tau class glutathione S-transferase 1 87 - -
Trre11g02947 219 CDD GST_N_Tau 5 78 - -
Trre11g02947 219 Gene3D - 88 219 - -
Trre11g02947 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Trre11g02947 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Trre11g02947 219 Coils Coil 118 138 - -
Trre11g02947 219 Gene3D Glutaredoxin 1 87 - -
Trre11g02947 219 FunFam Glutathione S-transferase U20 88 219 - -
Trre11g02947 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Trre11g02947 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Trre11g02947 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Trre11g02947 219 SFLD Main (cytGST) 2 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02947 Trre-Chr11 39328246 39329239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02947 1 214 Glutathione S-transferase Gene Family AT1G78380 68.224 7.69e-111 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02947 K00799 - gmx:547520 367.081