Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02928 ATGGCAGATGAAGTGATTCTGCTGGATTTTTGGCCTAGTCCTTTTGGAATAAGAGTGAGAATAGCCCTTGCTGAAAAGGGTATAAAATATGAATACATAGAGGAAGATTTGATGTCAATGAAAAAGAGCCCTTTGTTGCTAGAAATGAACCCGGTTCACAAGAAATCCCCGGTTCTCATCCACAATGGTAAACCCATTTGTGAGTCTCTAATTGCTTTTCAGTATATTGATGAAGTTTGGAATGAGTACAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTATTGTTACAAATGAACCCTGTTCATAAGAAAATCCCTGTTCTTATTCACAATGGTAAACCCATTGCTGAATCTCTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAAATCTTCTCTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTTTATTTTGGGCTGCCTATGTTGATAGCAAGATATATGCAATTTTTAGAAACATCTGTGTCAAAAAGGGAGAAGAACAAGAAGTTGCAAAAAAGGAATTCATAGAAACTCTCAAATTGTTGGAGGGACAGTTGGGAGATAAGTCTTATTTTGGAGGAGACAACTTTGGTTTTGTGGATATATCACTCATCCCATTCTATGGTCGATTCAATGTCGTTGAGATCTTTGGCAACATTGATATAGAGAGTGAGTGTCCTAAGCTCATTGCTTGGGGTAAGAGATGCATGAAGATTGAGAGTGTTTTCAAGTCTCTGCCAGACCAAGATAAGATCTATGAGTTCATTGTGGAGATGAGAAAGAAGTTAGGCGTTGAGTAG 813 0.3764 MADEVILLDFWPSPFGIRVRIALAEKGIKYEYIEEDLMSMKKSPLLLEMNPVHKKSPVLIHNGKPICESLIAFQYIDEVWNEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDKSSLLPSDPYQRSQALFWAAYVDSKIYAIFRNICVKKGEEQEVAKKEFIETLKLLEGQLGDKSYFGGDNFGFVDISLIPFYGRFNVVEIFGNIDIESECPKLIAWGKRCMKIESVFKSLPDQDKIYEFIVEMRKKLGVE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02928 270 SUPERFAMILY Thioredoxin-like 4 82 IPR036249 -
Trre11g02928 270 Gene3D - 139 270 - -
Trre11g02928 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 82 133 IPR004045 -
Trre11g02928 270 SFLD Main.3: Omega- and Tau-like 82 267 IPR045073 -
Trre11g02928 270 Pfam Glutathione S-transferase, N-terminal domain 83 127 IPR004045 -
Trre11g02928 270 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Trre11g02928 270 CDD GST_N_Tau 5 80 - -
Trre11g02928 270 FunFam Tau class glutathione S-transferase 1 83 - -
Trre11g02928 270 Pfam Glutathione S-transferase, C-terminal domain 175 236 - -
Trre11g02928 270 Gene3D Glutaredoxin 1 82 - -
Trre11g02928 270 Gene3D Glutaredoxin 83 138 - -
Trre11g02928 270 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 82 259 IPR045073 -
Trre11g02928 270 SFLD Main (cytGST) 82 267 - -
Trre11g02928 270 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 139 267 IPR010987 -
Trre11g02928 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Trre11g02928 270 FunFam Glutathione S-transferase U20 139 270 - -
Trre11g02928 270 CDD GST_C_Tau 140 263 IPR045074 GO:0004364|GO:0006749
Trre11g02928 270 SUPERFAMILY GST C-terminal domain-like 127 267 IPR036282 -
Trre11g02928 270 SUPERFAMILY Thioredoxin-like 82 132 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02928 Trre-Chr11 39142214 39143821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02928 1 270 Glutathione S-transferase Gene Family AT1G17180 54.444 1.82e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02928 K00799 - gmx:547520 330.487