Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02923 ATGGGAATGGGAAATAGTAGCATCAACTTGGTGTTTCATCATGGGTCAATGTTGCCTCATGAGCATGTAACTTCACTAGTGAGACCTGTGAAACTATGTGCACGTTTTCATTTGAGTTCTGCAACTTGGGCTGTTAAAAGTACTTCTAAAGATCAAAGATGGAAAGGTCTTACGCCACGGTTGTATGATTATGTCCTCGAAAATGTTCGGGAACCAGAGATTCTAAGGCAATTGCGAGCAGAGACGGCATCTATGCGAGGAAGCCAGATGCAGGTGTCTCCTGATCAGGCACAATTACTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTCGGCGTTTATACTGGTTACTCATCACTAGCCATAGCATTAGTCCTCCCAGAATCAGGTCGTTTAGTTGCATGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTTGCTGGTGTTTCACATAAGGTGGATATAAAACTTGGACTTGCAGCAGATTCTCTAGAATCTCTAATTATGAATGGTGAATCTGGAAGCTATGACTTTGCATTCATTGATGCTGAGAAAAGGATGACTGAGAAATACTTTGAGCTGCTATTACAGCTGGTGAGAGTTGGAGGTCTAATTGTAATTGATAATGTCCTTTGGCATGGGAAAGTTGCTGATCCATTGGTAAATGACCCTAAAACTAACAGCATTAGAAATTTTAATCAACGGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTGCCTATTGGAGATGGGATTACAATTTGTCGAAAAAGATGA 807 0.4114 MGMGNSSINLVFHHGSMLPHEHVTSLVRPVKLCARFHLSSATWAVKSTSKDQRWKGLTPRLYDYVLENVREPEILRQLRAETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDIKLGLAADSLESLIMNGESGSYDFAFIDAEKRMTEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDPKTNSIRNFNQRLMEDKRVSISMVPIGDGITICRKR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02923 268 Gene3D Vaccinia Virus protein VP39 57 268 IPR029063 -
Trre11g02923 268 PANTHER O-METHYLTRANSFERASE-RELATED 58 267 - -
Trre11g02923 268 CDD AdoMet_MTases 111 216 - -
Trre11g02923 268 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 51 268 IPR002935 GO:0008171
Trre11g02923 268 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 268 IPR029063 -
Trre11g02923 268 Pfam O-methyltransferase 69 267 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02923 Trre-Chr11 39061966 39065943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02923 56 256 Monolignol Biosynthesis Gene Families AT3G62000 80.597 2.07e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02923 - - gmx:100776619 414.846