Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02922 ATGGTAATTATGGGAATGGGAAATAGTAGCATCAACTTGGTGTTTCATCATGGGTCAATGTTGCCTCATGAGCATGTTGTTAGTCTTACGCCACGGTTGTATGATTATGTCCTCGAAAATGTTCGGGAACCAGAGATTCTAAGGCAATTGCGAGCAGAGACGGCATCTATGCGAGGAAGCCAGATGCAGGTGTCTCCTGATCAGGCACAATTACTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTCGGCGTTTATACTGGTTACTCATCACTAGCCATAGCATTAGTCCTCCCAGAATCAGGTCGTTTAGTTGCATGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTTGCTGGTGTTTCACATAAGGTGGATATAAAACTTGGACTTGCAGCAGATTCTCTAGAATCTCTAATTATGAATGGTGAATCTGGAAGCTATGACTTTGCATTCATTGATGCTGAGAAAAGGATGACTGAGAAATACTTTGAGCTGCTATTACAGCTGGTGAGAGTTGGAGGTCTAATTGTAATTGATAATGTCCTTTGGCATGGGAAAGTTGCTGATCCATTGGTAAATGACCCTAAAACTAACAGCATTAGAAATTTTAATCAACGGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTGCCTATTGGAGATGGGATTACAATTTGTCGAAAAAGATGA 723 0.4122 MVIMGMGNSSINLVFHHGSMLPHEHVVSLTPRLYDYVLENVREPEILRQLRAETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDIKLGLAADSLESLIMNGESGSYDFAFIDAEKRMTEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDPKTNSIRNFNQRLMEDKRVSISMVPIGDGITICRKR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02922 240 PANTHER O-METHYLTRANSFERASE-RELATED 24 239 - -
Trre11g02922 240 Pfam O-methyltransferase 41 239 IPR002935 GO:0008171
Trre11g02922 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 32 240 IPR029063 -
Trre11g02922 240 CDD AdoMet_MTases 83 188 - -
Trre11g02922 240 Gene3D Vaccinia Virus protein VP39 24 240 IPR029063 -
Trre11g02922 240 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 240 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02922 Trre-Chr11 39061957 39065943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02922 23 228 Monolignol Biosynthesis Gene Families AT3G62000 79.612 6.39e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02922 - - gmx:100776619 398.282