Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02914 ATGCATGACTATGATCTTCAGCCATTGCTGTATATGCTTGCTCAAATTATAAATGGAGTTGTTCTCCTCTTTCCTGGGCCTAGATATTTGCCACTGAGACTCAGATGTATCCAGTGGCTTAATCGTCTTGCTGGATCTAGTGGTGTTTTCATCCCGGTTACATCATTAGTGATGAATGTTCTAGAAACTCGCATAGGAGCTTCCTTACTTCGAATGCAATTGCATTTCCATGATTGCTTTGTTAACGGCTGTGATGCATCAATACTGTTGGATGATACAAGCAGTTTCATATGA 294 0.4048 MHDYDLQPLLYMLAQIINGVVLLFPGPRYLPLRLRCIQWLNRLAGSSGVFIPVTSLVMNVLETRIGASLLRMQLHFHDCFVNGCDASILLDDTSSFI 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02914 97 Pfam Noc2p family 3 63 IPR005343 -
Trre11g02914 97 Gene3D - 52 97 - -
Trre11g02914 97 ProSiteProfiles Plant heme peroxidase family profile. 72 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g02914 97 Pfam Peroxidase 62 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g02914 97 SUPERFAMILY Heme-dependent peroxidases 53 96 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g02914 97 PANTHER NUCLEOLAR COMPLEX 2 AND RAD4-RELATED 4 64 IPR005343 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02914 Trre-Chr11 38765318 38765713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02914 49 96 Peroxidase AT4G08780 66.000 1.22e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02914 K14833 - gmx:100810517 119.398