Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02865 ATGATGCATGTATCATGGTTGGAAAAATTGTGGGCAATCACTACATTTTTTACAACTTGTGAAGTTCATCCAAACGATCCCAAAAATGAGTTTAACAAGTTCTGCATCGATTGCATTGACAATCCATTATGCGGATCTTGTGTAAAATCTCATCACAGAGATCACAACGTAATCCAAATAAGGAGATCATCATATAATGAAGTAGTTAAGACGACTGAAATTTACAAGCATGTGGACATCCTTGGAATTCAAACATATGTGATCAATAGCTCTACAGTTGTATTCTTAAATAAGAGGACTCGACCCCATCCTAAAAGGAGCAATATTGGTAAAATTGGTCACATTACCAACTCTCTTTGCAAGACATGTGATAGAAATCTTGTGGATTCTTCTTGGTTTTGCTCTTTAGCATGCAAGTTTGAATATATAAAGAAGAATGGAGGCTTTTCTGTAAACCCAGAAGAAATGGAAAGATTGCTGGAGAAATCGATTAAGGTATCACCACAAAAAGAAAAATCAAATAGTTCACGTGAACAAAATCTAAAACGAAAAGTAGATGAAGCGGGAATTGACGAAGAAAATGATGACGGTGAAGAGAAAGAAGGCAACAAAGAAAGTGCCCTTCTTGTTAATCGTCCATCGACTTCATTTCGCAAGTCAAATTCAAGAAGAAAGAGAATACCTCACAGGGCTCCTTTTTTTTAA 705 0.3589 MMHVSWLEKLWAITTFFTTCEVHPNDPKNEFNKFCIDCIDNPLCGSCVKSHHRDHNVIQIRRSSYNEVVKTTEIYKHVDILGIQTYVINSSTVVFLNKRTRPHPKRSNIGKIGHITNSLCKTCDRNLVDSSWFCSLACKFEYIKKNGGFSVNPEEMERLLEKSIKVSPQKEKSNSSREQNLKRKVDEAGIDEENDDGEEKEGNKESALLVNRPSTSFRKSNSRRKRIPHRAPFF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02865 234 MobiDBLite consensus disorder prediction 163 190 - -
Trre11g02865 234 Pfam PLATZ transcription factor 61 139 IPR006734 -
Trre11g02865 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 233 - -
Trre11g02865 234 MobiDBLite consensus disorder prediction 218 234 - -
Trre11g02865 234 Gene3D Classic Zinc Finger 15 79 - -
Trre11g02865 234 MobiDBLite consensus disorder prediction 163 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02865 Trre-Chr11 38013706 38015219 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre11g02865 PLATZ 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02865 - - cam:101499108 286.96