Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02843 ATGGATGTTATCATTTCAGTTTCTGCAAAAATTGCTGAATATATGGTTGTACCCATTGGTCGTCAATTTGGTTACATACTGTACTACAAGGGCAACCTTGTAAGGATAGAAACTGATGTCCAAAATCTGGAGGGAACAAAATACAGTGTGCAACACACTGTTGACGAGGCTAGAAGGAATGGAGAAGAAATTGAAAATATTGTCCAGAACTGGCTGAACAAAGTGGACAGCACTGTTGCTGAGGCAAAGAAACTTATTAACAATGAAAGCCATGCCAAAGCTCAATGTTCCATGGGACACTTTCCTAATCTGTGCACAAGGCACCAGCTGAGCAGGAAGACAAAAAAGATGATACAAAAGATTTCTGAAGTCCTTGCAGAAGGAAAATTTGACAAAATTTCTTACCGCGCTACTTCTCAAGTGACAGTCACGCCATTTGGTAGAGGTTACAAGGCCCTGGACTCCAGAACATCAATGTTGAGTGAGATTATGCTGGCATTGAAGAATCCTAACATCTTCGTTATTGGGGTGTATGGGATGGGTGGAGTGGGGAAGACAACAATAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATCCGTCATTTAGTTCAGTTGTTATGGCTACAATCACCGATTCTCCAGATGTGGAAAAAATCCAAGGCCAAATTGCTGATGCCTTGGATATGAAATTTAACAAGGAGTCCATAGAAGGAAGAGCAACACAATTACGGAAAAGGATAACCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGTAGACTTGATTTGGCAGAAGTGGGGATTCCTTTTGGTGATGACCACAAAGGATGCAAGTTAGTGGTGACATCCAGAGATCTTAATGTGTTGAACTGTGAAATGGGCACTCAGAAAGAATTTAGGCTTGAAGTTTTACATCAGGAGGATAGTTGGAAATTGTTTGAGGAAGTGGCAGGTGATATTGTTCAAGAATTAAATATAAAGCCAATTGCAGTAGAAATAGCCAAATGTTGTACTGGCTTGCCTCTTTTGATAGTTCCTATGGCGAAGGCTTTGAGAAAAAAAGATGCCTCTGCTTGGAAAGATGCCTTAAATCAATTAAAGAGATTTGATCAACAAGGTTTGCATAAGAAAGTCTACTCTACCTTTGAGTTGAGTTATAATTGGTTAGAAAGGGAAGACCTGAAGTCACTCTTCCGATTCATCGGTTCATTTGGACTGGACCATATCCACACTGAAATATTGTTTCAATGTTATTGGAGTTCGGGGTTTTGTGAACATCTTCAGACATTGACAGAGGCTCGAAATCGATATGTCAACTTAATAAATGACCTTAGGGCTGCTTCATTGTTACTTGAACGTGAAAGGGTAAAACTATGGCCAAAGATAGATCAGCTTTGA 1407 0.4001 MDVIISVSAKIAEYMVVPIGRQFGYILYYKGNLVRIETDVQNLEGTKYSVQHTVDEARRNGEEIENIVQNWLNKVDSTVAEAKKLINNESHAKAQCSMGHFPNLCTRHQLSRKTKKMIQKISEVLAEGKFDKISYRATSQVTVTPFGRGYKALDSRTSMLSEIMLALKNPNIFVIGVYGMGGVGKTTIVKELAWQAENDPSFSSVVMATITDSPDVEKIQGQIADALDMKFNKESIEGRATQLRKRITKEKSILVILDDIWGRLDLAEVGIPFGDDHKGCKLVVTSRDLNVLNCEMGTQKEFRLEVLHQEDSWKLFEEVAGDIVQELNIKPIAVEIAKCCTGLPLLIVPMAKALRKKDASAWKDALNQLKRFDQQGLHKKVYSTFELSYNWLEREDLKSLFRFIGSFGLDHIHTEILFQCYWSSGFCEHLQTLTEARNRYVNLINDLRAASLLLERERVKLWPKIDQL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02843 468 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 460 - -
Trre11g02843 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 404 IPR027417 -
Trre11g02843 468 Gene3D - 306 393 IPR042197 -
Trre11g02843 468 Gene3D - 147 305 IPR027417 -
Trre11g02843 468 FunFam Probable disease resistance protein At1g61300 146 301 - -
Trre11g02843 468 Pfam NB-ARC domain 164 389 IPR002182 GO:0043531
Trre11g02843 468 PRINTS Disease resistance protein signature 174 189 - -
Trre11g02843 468 PRINTS Disease resistance protein signature 340 354 - -
Trre11g02843 468 PRINTS Disease resistance protein signature 247 261 - -
Trre11g02843 468 Coils Coil 54 74 - -
Trre11g02843 468 Coils Coil 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02843 Trre-Chr11 37653460 37654959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02843 162 462 WRKY Transcription Factor Family AT5G45050 26.524 3.76e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02843 - - mtr:120578394 656.751