Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02840 ATGGATGCCATTATTTCAGTTGCTGCTAAAATTTCTGAATTTACGTTTGCACCTATTGGACGTCAATTTGGTTACATACTGTACTACAAGGGCAACCTTGTAAGGATGACAACTGATGTCGGAAGTCTGGAGGGAACAAAAGACAGTGTGCAACACACTGTTGACGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAGAACTGGCTGAACAAAGTTGGCAGCACTGTTGCTGAAGCAAAGAAACTTATTAACACTGAAAGCCATGTCAGAGCTCAATGTTCTTTGGGACACTTTCCTAATCTGTACACAAGGCACCAGCTGAGCAGGAAGACAAAAAAGATGATACAAAAGATTTCTGAAGTCCTAGCAGAAGGAAAATTTGACAGAATTTCTTATCGTGCTGCTTCTCAAGTCACAGTCACACCGTTCGGTAGAAGTTATGAGGCCCTGCACTCCAGAACATCAATGTTGAATGATGTTATGCTGGCATTGAAGAATCCTGGCATCTTCATTATTGGGGTGTATGGGATGGGTGGAGTGGGGAAGACAACATTTGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGAAGGGTCATTTAGTGCTGTAGCTATGGCTACTATCAATTATTCTCCAGATGTGGAAAAAATTCAAGACCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGTCCAAAGCAGGAAGAGCAACACAATTACGGGAAAGGATAGCCAAGGAGACAAATATTCTTGTTATCCTGGATGACATTTGGGGGAGACTTGATTTGGCAGAACTGGGGGTTCCTTTTGGTGATGACCACAAAGGATGCAAGTTGGTGGTAACCTCCAGAGATCTTAATGTGTTGAACTGTGAGATTGGCACTCAAAAAGAATTTAGACTGGAAGTTTTACTTGAGGATGATAGTTGGAAATTGTTTGAAAAAATGGCAGGTGATGTTGTTCAAGATTTCAATATAAAGCAAATTGCAGTAAAAGTGGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGGTTTGAGGAAAAAGCATGTCTCTGCTTGGAAGGATGCCTTAAATGAATTAGAGAGATTTGATCAAGAAGGGTTGCATAAGAAAGTGTTTTCTACTCTGGAGTTGAGTTATAATTGTTTAGAGAGTGAGGAACTGAAGTTGCTATTCTTATTCATTGGTTCTTCTGGAGTAGACTATATCTATACCGGAGAATTGTTTTCATGTTCTTGGGGGTTTGGCATATATAGGCATGCTCGCACGTTGACACATGCAAGAAATAGATGCTACAAGTTAATAAATGACCTCAAGGCCTCTTCATTGTTAATTGAGTCCAAAACTGAATTAGTTAGAATGCATGATGTTGTTAGAGAGGTGGCTAAATCAATTGCCTCTAGGCTTCATCCTATCTATGGCGTGCAAAGGTATACTGTACTGAAAAAATGGCCAAAGATAGATCAGCTTCAAAAGTTAGATGCAATTGTTGTGCCTTGGTCTTACATTCACGAACTTCCTGAAAAGTTAGATTGCCCAGAGCTGAAACTACTTTTGCTTCAAACTATCGGTGACCAATTGAAAATCCCTGATGAGTTTTTCTCTGTGACGAGAGAATTAAAGGTTCTTGATTTAGTTGGAATGATGTTAACACCTTTTCCACCTCATTCCCTCCGCCTCTTGACAAACATTCAATCATTAGCTCTTTCTGGATGTGTGTTAGGAGACATATCAATAGTTGCAGAGCTGAAAAGTTTAGAGATTCTCAGCCTTGAAAAATCAGATATTGTTGAACTTCCAAAGGAAATTGGACAACTAGCTAATCTTCGGATGTTGAATCTCACCAGCTGCTCTCGACTCAGATTCATTCCTGCAAATCTTCTTTCAAGCTTGACATGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGAATATCAAGGGAAGCAGAGATGAAAGCAACAATGCAAGTCTAGATGAGCTCATGAATTTGTCTCATCTAACAACATTAGACATAACGATTCAGGATGTTACAGTTTGGCCAAGGGACTTGCAGATCTTTGCAAAGCTTGAAAGATACAACATATTTATTGGTGACATGTGGAAATGGTCTTTGTATCTGGCTGGAGGGGCTTCTGAATCTTCAAGAACACTCAAGCTCACGGAGAGTGATAGTTCAAGCATTCTTTTGGACGTTGGGTTTAACTTCTTGTTGAATTCAGCTGAGGACATGTGCCTAGCCAGATTACAGTGTGGTAAAGATGTCCTTTCTGAACTGAACATGGAAGGTTTTCCACAGGTAAAGCACTTATGCATTCAAGACAGTGCTGAACTGAAGTTCATCATTAACTCAATGGGGTGGATTCATCCCTATCCCGCTTTCCTCAGCTTAGAGACTTTGGTGCTTCAAAATCTGCTTAATTTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTCTTACCAAATTAAAATCTATTGAAGTCAAAGGTTGTGAGAAGTTGAAGAGTCTGTTATGGCATTCCCTTGTTAGAGACCTTCCTCAACTTCTTGAAATAAAAATCTCTGATTGCAAAATGATTACAGAAATCGTAGCTGTGCAAACATCTGAAGCTGATAAAGAAATCAACAAGGTTATGTTCCCCAAGTTGCGTTCTCTTGAACTTGAATGTTTGCCGAGTCTCGTTAGTTTCTGTTCTGTGCCATTGACAGCTGGACAATCCACACCTTTGGGACTAATTGATAAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGGAAATTGTGGGATGACAACCTTGCAGGTCATTCTTCCATTCAAAACTTGACGAGTTTGACAATTGACAAATGTGGTAGCATAGCTTACGCATTTTCGTCCTCAGTGGCTATAGAACTTCTAAACCTGCATTATATTGGGATTAGTAATTGTGCAATGATGGAGGAGATATTTGTCTCGGATAGAAAGTTAGGTAGTCTTCCTTCTCAGAAACCATTGTCCGATGATGAGGTTATATTTCCAAACTTGGAGATATTGGAAATCTCCCACATGGAACACTTGAAGACAGTTTGGCACAATCAACTAGCTCCAAATTCCTTCTGCAAACTGAAGCAGTTGAAAATTGAATCCTGCAATAAATTATCAAATGTATTACCATCCTATGTGCTTGATAAATTACAGAATTTGGAGACAGTGACTGTAAGTGATTGTCATGCACTGGAATTTGTATTTGAAACTCAAGGTCTTAAAGCAGATGGTGGCAGACAAACAGGGCTAGAAATGAAATTGGGAACTCTCACTTTGAAACATTTACCCATGCTTAAACACATATGGAGTGGAAATCCTAATAAAATTTTGAACTTTCAAAACCTCTGCCAATTGAAGGTTATTGGATGCCAAAACCTTAATCATGTTTTTCCTCTCTCTGTGGCTAAAGAGCTTCAGCGTCTCCAAGTGCTTCATATAGAAGAATGTGGCATAGAGATTATTGTAGCACAAGATGGAATCGCTGACACAACTCCAATGCTTAATTTTCCAAAATTAACAACTTTGTGTTTTCGAGAATTGTCACTACTTCGAAGCTTCTATCATGTATCATATACCTTGAATTGTCCTGTTTTAAGGGATGTGGATGTGTTTCATTGTGACAATCTCATACTATTCCAGCCAAAGTCTTTAGATAACCGTGGCAATGTTTCAGTTGAAACATCACCCCTTCTCTCTATTGAAAAGGTTGTCACAAACGCAAAGGAGCTTATTCTGACTTGCAAGGATGTCACCATGTTATGCAGCGGTCAACTTAATGATGAGCCTATCTACAAAGTTAAAGCTCTTTGCCTGCAATGTTTTCATGATGAGTCAGACAAGTTTCCATCTGATTTCCTCGAAAGATTTATCAATCTTGAAAATCTTAAGATGTCTTGTAGTTCTTTCACGGAGATTTTCTCAAGTGGAAGCTTTGGCACTGGACATTCTGAAACAAAGGTGAAGTTGAGAAAACTAGTACTTGTTGAATTAAAAAACCTCGAGTTTATATGTAAAGAGAAATCTGAGGTGCAAATTCTTCAAAATATTGAAATGTTGAGAGTATCTAAATGCTCTAGACTGAAAAATATAGTTCCATCCTCAGTGCTGTTTGGGAATTTAGAGCAGTTGATGGTAAGCAATTGTGCTGGATTAGAAAATATTATGAAATCTTCAGTGATCAATAATATACAAAAACTGAGAATATTATGCATAGATGGTTGTGAAAAGATAGAAGAAATAATTGCAAGTGATGATGAGAATGATGCTTCTGAGCTTGCTTTTATGAAATTGGAGTATTTGCAATTGGATAACTTACCAAAGCTAAGAAGTTTTTGCAAGGGAAAACATAGCTTCAAATTTCCACTACTGCAGAGGTTACTAGTAATAGATTGTCCTATGATGGAAACTTTCTCACATGGAGTCTTGGACGCACCAAGGCTCAGAGCAGTACATGTGAAGCGAAAAGATGAATGGCATTGGAATGGTGACATTAATTCTACTATAAGAAAATTTGTAGCGAAAAAAGAACTCTAA 4614 0.3871 MDAIISVAAKISEFTFAPIGRQFGYILYYKGNLVRMTTDVGSLEGTKDSVQHTVDEARRNGEEIENIVQNWLNKVGSTVAEAKKLINTESHVRAQCSLGHFPNLYTRHQLSRKTKKMIQKISEVLAEGKFDRISYRAASQVTVTPFGRSYEALHSRTSMLNDVMLALKNPGIFIIGVYGMGGVGKTTFVKELAWQAENEGSFSAVAMATINYSPDVEKIQDQIADALDLKFNKESKAGRATQLRERIAKETNILVILDDIWGRLDLAELGVPFGDDHKGCKLVVTSRDLNVLNCEIGTQKEFRLEVLLEDDSWKLFEKMAGDVVQDFNIKQIAVKVAKCCAGLPLLIVTVAKGLRKKHVSAWKDALNELERFDQEGLHKKVFSTLELSYNCLESEELKLLFLFIGSSGVDYIYTGELFSCSWGFGIYRHARTLTHARNRCYKLINDLKASSLLIESKTELVRMHDVVREVAKSIASRLHPIYGVQRYTVLKKWPKIDQLQKLDAIVVPWSYIHELPEKLDCPELKLLLLQTIGDQLKIPDEFFSVTRELKVLDLVGMMLTPFPPHSLRLLTNIQSLALSGCVLGDISIVAELKSLEILSLEKSDIVELPKEIGQLANLRMLNLTSCSRLRFIPANLLSSLTCLEELYMGNCFIQWNIKGSRDESNNASLDELMNLSHLTTLDITIQDVTVWPRDLQIFAKLERYNIFIGDMWKWSLYLAGGASESSRTLKLTESDSSSILLDVGFNFLLNSAEDMCLARLQCGKDVLSELNMEGFPQVKHLCIQDSAELKFIINSMGWIHPYPAFLSLETLVLQNLLNLEEICHGPIPIQSLTKLKSIEVKGCEKLKSLLWHSLVRDLPQLLEIKISDCKMITEIVAVQTSEADKEINKVMFPKLRSLELECLPSLVSFCSVPLTAGQSTPLGLIDKKVGMPHLELLKLSNINSRKLWDDNLAGHSSIQNLTSLTIDKCGSIAYAFSSSVAIELLNLHYIGISNCAMMEEIFVSDRKLGSLPSQKPLSDDEVIFPNLEILEISHMEHLKTVWHNQLAPNSFCKLKQLKIESCNKLSNVLPSYVLDKLQNLETVTVSDCHALEFVFETQGLKADGGRQTGLEMKLGTLTLKHLPMLKHIWSGNPNKILNFQNLCQLKVIGCQNLNHVFPLSVAKELQRLQVLHIEECGIEIIVAQDGIADTTPMLNFPKLTTLCFRELSLLRSFYHVSYTLNCPVLRDVDVFHCDNLILFQPKSLDNRGNVSVETSPLLSIEKVVTNAKELILTCKDVTMLCSGQLNDEPIYKVKALCLQCFHDESDKFPSDFLERFINLENLKMSCSSFTEIFSSGSFGTGHSETKVKLRKLVLVELKNLEFICKEKSEVQILQNIEMLRVSKCSRLKNIVPSSVLFGNLEQLMVSNCAGLENIMKSSVINNIQKLRILCIDGCEKIEEIIASDDENDASELAFMKLEYLQLDNLPKLRSFCKGKHSFKFPLLQRLLVIDCPMMETFSHGVLDAPRLRAVHVKRKDEWHWNGDINSTIRKFVAKKEL 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02840 1537 SUPERFAMILY RNI-like 925 1237 - -
Trre11g02840 1537 SUPERFAMILY L domain-like 462 907 - -
Trre11g02840 1537 Gene3D - 143 299 IPR027417 -
Trre11g02840 1537 Gene3D Ribonuclease Inhibitor 449 715 IPR032675 -
Trre11g02840 1537 Gene3D Ribonuclease Inhibitor 1305 1519 IPR032675 -
Trre11g02840 1537 Gene3D - 306 393 IPR042197 -
Trre11g02840 1537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 404 IPR027417 -
Trre11g02840 1537 SUPERFAMILY RNI-like 1287 1512 - -
Trre11g02840 1537 Pfam NB-ARC domain 162 390 IPR002182 GO:0043531
Trre11g02840 1537 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1078 1240 - -
Trre11g02840 1537 Gene3D Ribonuclease Inhibitor 716 914 IPR032675 -
Trre11g02840 1537 Gene3D Ribonuclease Inhibitor 915 1237 IPR032675 -
Trre11g02840 1537 PRINTS Disease resistance protein signature 174 189 - -
Trre11g02840 1537 PRINTS Disease resistance protein signature 613 629 - -
Trre11g02840 1537 PRINTS Disease resistance protein signature 340 354 - -
Trre11g02840 1537 PRINTS Disease resistance protein signature 247 261 - -
Trre11g02840 1537 Coils Coil 54 74 - -
Trre11g02840 1537 SMART AAA_5 171 302 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02840 Trre-Chr11 37635744 37641593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02840 172 477 WRKY Transcription Factor Family AT5G45050 26.791 2.33e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02840 - - mtr:25487104 2061.57