Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02839 ATGGATGCCATTATTTCAGTTGCTGCTAAAATTTCTGAATTTACGTTTGCACCTATTGGACGTCAATTTGGTTACATACTGTACTACAAGGGCAACCTTGTAAGGATGACAACTGATGTCGGAAGTCTGGAGGGAACAAAAGACAGTGTGCAACACACTGTTGACGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAGAACTGGCTGAACAAAGTTGGCAGCACTGTTGCTGAAGCAAAGAAACTTATTAACACTGAAAGCCATGTCAGAGCTCAATGTTCTTTGGGACACTTTCCTAATCTGTACACAAGGCACCAGCTGAGCAGGAAGACAAAAAAGATGATACAAAAGATTTCTGAAGTCCTAGCAGAAGGAAAATTTGACAGAATTTCTTATCGTGCTGCTTCTCAAGTCACAGTCACACCGTTCGGTAGAAGTTATGAGGCCCTGCACTCCAGAACATCAATGTTGAATGATGTTATGCTGGCATTGAAGAATCCTGGCATCTTCATTATTGGGGTGTATGGGATGGGTGGAGTGGGGAAGACAACATTTGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGAAGGGTCATTTAGTGCTGTAGCTATGGCTACTATCAATTATTCTCCAGATGTGGAAAAAATTCAAGACCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGTCCAAAGCAGGAAGAGCAACACAATTACGGGAAAGGATAGCCAAGGAGACAAATATTCTTGTTATCCTGGATGACATTTGGGGGAGACTTGATTTGGCAGAACTGGGGGTTCCTTTTGGTGATGACCACAAAGGATGCAAGTTGGTGGTAACCTCCAGAGATCTTAATGTGTTGAACTGTGAGATTGGCACTCAAAAAGAATTTAGACTGGAAGTTTTACTTGAGGATGATAGTTGGAAATTGTTTGAAAAAATGGCAGGTGATGTTGTTCAAGATTTCAATATAAAGCAAATTGCAGTAAAAGTGGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGGTTTGAGGAAAAAGCATGTCTCTGCTTGGAAGGATGCCTTAAATGAATTAGAGAGATTTGATCAAGAAGGGTTGCATAAGAAAGTGTTTTCTACTCTGGAGTTGAGTTATAATTGTTTAGAGAGTGAGGAACTGAAGTTGCTATTCTTATTCATTGGTTCTTCTGGAGTAGACTATATCTATACCGGAGAATTGTTTTCATGTTCTTGGGGGTTTGGCATATATAGGCATGCTCGCACGTTGACACATGCAAGAAATAGATGCTACAAGTTAATAAATGACCTCAAGGCCTCTTCATTGTTAATTGAGTCCAAAACTGAATTAGTTAGAATGCATGATGTTGTTAGAGAGGTGGCTAAATCAATTGCCTCTAGGCTTCATCCTATCTATGGCGTGCAAAGGTATACTGTACTGAAAAAATGGCCAAAGATAGATCAGCTTCAAAAGTTAGATGCAATTGTTGTGCCTTGGTCTTACATTCACGAACTTCCTGAAAAGTTAGATTGCCCAGAGCTGAAACTACTTTTGCTTCAAACTATCGGTGACCAATTGAAAATCCCTGATGAGTTTTTCTCTGTGACGAGAGAATTAAAGGTTCTTGATTTAGTTGGAATGATGTTAACACCTTTTCCACCTCATTCCCTCCGCCTCTTGACAAACATTCAATCATTAGCTCTTTCTGGATGTGTGTTAGGAGACATATCAATAGTTGCAGAGCTGAAAAGTTTAGAGATTCTCAGCCTTGAAAAATCAGATATTGTTGAACTTCCAAAGGAAATTGGACAACTAGCTAATCTTCGGATGTTGAATCTCACCAGCTGCTCTCGACTCAGATTCATTCCTGCAAATCTTCTTTCAAGCTTGACATGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGAATATCAAGGGAAGCAGAGATGAAAGCAACAATGCAAGTCTAGATGAGCTCATGAATTTGTCTCATCTAACAACATTAGACATAACGATTCAGGATGTTACAGTTTGGCCAAGGGACTTGCAGATCTTTGCAAAGCTTGAAAGATACAACATATTTATTGGTGACATGTGGAAATGGTCTTTGTATCTGGCTGGAGGGGCTTCTGAATCTTCAAGAACACTCAAGCTCACGGAGAGTGATAGTTCAAGCATTCTTTTGGACGTTGGGTTTAACTTCTTGTTGAATTCAGCTGAGGACATGTGCCTAGCCAGATTACAGTGTGGTAAAGATGTCCTTTCTGAACTGAACATGGAAGGTTTTCCACAGGTAAAGCACTTATGCATTCAAGACAGTGCTGAACTGAAGTTCATCATTAACTCAATGGGGTGGATTCATCCCTATCCCGCTTTCCTCAGCTTAGAGACTTTGGTGCTTCAAAATCTGCTTAATTTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTCTTACCAAATTAAAATCTATTGAAGTCAAAGAAATCGTAGCTGTGCAAACATCTGAAGCTGATAAAGAAATCAACAAGGTTATGTTCCCCAAGTTGCGTTCTCTTGAACTTGAATGTTTGCCGAGTCTCGTTAGTTTCTGTTCTGTGCCATTGACAGCTGGACAATCCACACCTTTGGGACTAATTGATAAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGGAAATTGTGGGATGACAACCTTGCAGTGGCTATAGAACTTCTAAACCTGCATTATATTGGGATTAGTAATTGTGCAATGATGGAGGAGATATTTGTCTCGGATAGAAAGTTAGGTAGTCTTCCTTCTCAGAAACCATTGTCCGATGATGAGGTTATATTTCCAAACTTGGAGATATTGGAAATCTCCCACATGGAACACTTGAAGACAGTTTGGCACAATCAACTAGCTCCAAATTCCTTCTGCAAACTGAAGCAGTTGAAAATTGAATCCTGCAATAAATTATCAAATGTATTACCATCCTATGTGCTTGATAAATTACAGAATTTGGAGACAGTGACTGTAAGTGATTGTCATGCACTGGAATTTGTATTTGAAACTCAAGGTCTTAAAGCAGATGGTGGCAGACAAACAGGGCTAGAAATGAAATTGGGAACTCTCACTTTGAAACATTTACCCATGCTTAAACACATATGGAGTGGAAATCCTAATAAAATTTTGAACTTTCAAAACCTCTGCCAATTGAAGGTTATTGGATGCCAAAACCTTAATCATGTTTTTCCTCTCTCTGTGGCTAAAGAGCTTCAGCGTCTCCAAGTGCTTCATATAGAAGAATGTGGCATAGAGATTATTGTAGCACAAGATGGAATCGCTGACACAACTCCAATGCTTAATTTTCCAAAATTAACAACTTTGTGTTTTCGAGAATTGTCACTACTTCGAAGCTTCTATCATGTATCATATACCTTGAATTGTCCTGTTTTAAGGGATGTGGATGTGTTTCATTGTGACAATCTCATACTATTCCAGCCAAAGTCTTTAGATAACCGTGGCAATGTTTCAGTTGAAACATCACCCCTTCTCTCTATTGAAAAGGTTGTCACAAACGCAAAGGAGCTTATTCTGACTTGCAAGGATGTCACCATGTTATGCAGCGGTCAACTTAATGATGAGCCTATCTACAAAGTTAAAGCTCTTTGCCTGCAATGTTTTCATGATGAGTCAGACAAGTTTCCATCTGATTTCCTCGAAAGATTTATCAATCTTGAAAATCTTAAGATGTCTTGTAGTTCTTTCACGGAGATTTTCTCAAGTGGAAGCTTTGGCACTGGACATTCTGAAACAAAGGTGAAGTTGAGAAAACTAGTACTTGTTGAATTAAAAAACCTCGAGTTTATATGTAAAGAGAAATCTGAGGTGCAAATTCTTCAAAATATTGAAATGTTGAGAGTATCTAAATGCTCTAGACTGAAAAATATAGTTCCATCCTCAGTGCTGTTTGGGAATTTAGAGCAGTTGATGGTAAGCAATTGTGCTGGATTAGAAAATATTATGAAATCTTCAGTGATCAATAATATACAAAAACTGAGAATATTATGCATAGATGGTTGTGAAAAGATAGAAGAAATAATTGCAAGTGATGATGAGAATGATGCTTCTGAGCTTGCTTTTATGAAATTGGAGTATTTGCAATTGGATAACTTACCAAAGCTAAGAAGTTTTTGCAAGGGAAAACATAGCTTCAAATTTCCACTACTGCAGAGGTTACTAGTAATAGATTGTCCTATGATGGAAACTTTCTCACATGGAGTCTTGGACGCACCAAGGCTCAGAGCAGTACATGTGAAGCGAAAAGATGAATGGCATTGGAATGGTGACATTAATTCTACTATAAGAAAATTTGTAGCGAAAAAAGGTAATAACTCTAAGGATGATTGTGTTTGTCCTCAAAATTTGAATGAAGGCTCAAAAAGATAA 4494 0.3865 MDAIISVAAKISEFTFAPIGRQFGYILYYKGNLVRMTTDVGSLEGTKDSVQHTVDEARRNGEEIENIVQNWLNKVGSTVAEAKKLINTESHVRAQCSLGHFPNLYTRHQLSRKTKKMIQKISEVLAEGKFDRISYRAASQVTVTPFGRSYEALHSRTSMLNDVMLALKNPGIFIIGVYGMGGVGKTTFVKELAWQAENEGSFSAVAMATINYSPDVEKIQDQIADALDLKFNKESKAGRATQLRERIAKETNILVILDDIWGRLDLAELGVPFGDDHKGCKLVVTSRDLNVLNCEIGTQKEFRLEVLLEDDSWKLFEKMAGDVVQDFNIKQIAVKVAKCCAGLPLLIVTVAKGLRKKHVSAWKDALNELERFDQEGLHKKVFSTLELSYNCLESEELKLLFLFIGSSGVDYIYTGELFSCSWGFGIYRHARTLTHARNRCYKLINDLKASSLLIESKTELVRMHDVVREVAKSIASRLHPIYGVQRYTVLKKWPKIDQLQKLDAIVVPWSYIHELPEKLDCPELKLLLLQTIGDQLKIPDEFFSVTRELKVLDLVGMMLTPFPPHSLRLLTNIQSLALSGCVLGDISIVAELKSLEILSLEKSDIVELPKEIGQLANLRMLNLTSCSRLRFIPANLLSSLTCLEELYMGNCFIQWNIKGSRDESNNASLDELMNLSHLTTLDITIQDVTVWPRDLQIFAKLERYNIFIGDMWKWSLYLAGGASESSRTLKLTESDSSSILLDVGFNFLLNSAEDMCLARLQCGKDVLSELNMEGFPQVKHLCIQDSAELKFIINSMGWIHPYPAFLSLETLVLQNLLNLEEICHGPIPIQSLTKLKSIEVKEIVAVQTSEADKEINKVMFPKLRSLELECLPSLVSFCSVPLTAGQSTPLGLIDKKVGMPHLELLKLSNINSRKLWDDNLAVAIELLNLHYIGISNCAMMEEIFVSDRKLGSLPSQKPLSDDEVIFPNLEILEISHMEHLKTVWHNQLAPNSFCKLKQLKIESCNKLSNVLPSYVLDKLQNLETVTVSDCHALEFVFETQGLKADGGRQTGLEMKLGTLTLKHLPMLKHIWSGNPNKILNFQNLCQLKVIGCQNLNHVFPLSVAKELQRLQVLHIEECGIEIIVAQDGIADTTPMLNFPKLTTLCFRELSLLRSFYHVSYTLNCPVLRDVDVFHCDNLILFQPKSLDNRGNVSVETSPLLSIEKVVTNAKELILTCKDVTMLCSGQLNDEPIYKVKALCLQCFHDESDKFPSDFLERFINLENLKMSCSSFTEIFSSGSFGTGHSETKVKLRKLVLVELKNLEFICKEKSEVQILQNIEMLRVSKCSRLKNIVPSSVLFGNLEQLMVSNCAGLENIMKSSVINNIQKLRILCIDGCEKIEEIIASDDENDASELAFMKLEYLQLDNLPKLRSFCKGKHSFKFPLLQRLLVIDCPMMETFSHGVLDAPRLRAVHVKRKDEWHWNGDINSTIRKFVAKKGNNSKDDCVCPQNLNEGSKR 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02839 1497 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1227 1449 - -
Trre11g02839 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 404 IPR027417 -
Trre11g02839 1497 Gene3D Ribonuclease Inhibitor 449 718 IPR032675 -
Trre11g02839 1497 Gene3D - 143 299 IPR027417 -
Trre11g02839 1497 PRINTS Disease resistance protein signature 174 189 - -
Trre11g02839 1497 PRINTS Disease resistance protein signature 340 354 - -
Trre11g02839 1497 PRINTS Disease resistance protein signature 613 629 - -
Trre11g02839 1497 PRINTS Disease resistance protein signature 247 261 - -
Trre11g02839 1497 Gene3D - 306 393 IPR042197 -
Trre11g02839 1497 Gene3D Ribonuclease Inhibitor 1248 1460 IPR032675 -
Trre11g02839 1497 SUPERFAMILY L domain-like 462 1180 - -
Trre11g02839 1497 SUPERFAMILY RNI-like 1229 1454 - -
Trre11g02839 1497 Gene3D Ribonuclease Inhibitor 724 1177 IPR032675 -
Trre11g02839 1497 SUPERFAMILY RNI-like 773 946 - -
Trre11g02839 1497 Pfam NB-ARC domain 162 390 IPR002182 GO:0043531
Trre11g02839 1497 Coils Coil 54 74 - -
Trre11g02839 1497 SMART AAA_5 171 302 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02839 Trre-Chr11 37635695 37641593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02839 172 477 WRKY Transcription Factor Family AT5G45050 26.791 2.47e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02839 - - mtr:25487104 1950.64