Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02835 ATGGATGTTATCATTTCAGTTTCTGCAAAAATTGCTGAATATATGGTTGTACCCATTGGTCGTCAATTTGGTTACATACTGTACTACAAGGGCAACCTTGTAAGGATAGAAACTGATGTCCAAAATCTGGAGGGAACAAAATACAGTGTGCAACACACTGTTGACGAGGCTAGAAGGAATGGAGAAGAAATTGAAATTATTGTCCAGAACTGGCTGAACAAAGTGGACAGCACTGTTGCTGAAGCAAAGAAACTTATTAACACTGAAAGCCATGCCAAAGCTCAATGTTCTATGGGACACTTTCCTAATCTGTGCACAAGGCACCAGCTGAGCAGGAAGACAAAAAAGATGATACAAAAGATTTCTGAAGTCCTAGCAGAAGGAAAATTTGACAAAATTTCTTACCGCGCTACTTCTCAAGTGACAGTCACGCCATTTGGTAGAGGTTACAAGGCCCTGGACTCCAGAACATCAATGTTGAGTGAGATTATGCTGGCATTGAAGAATCCTAACATCTTCGTTATTGGGGTGTATGGGATGGGTGGAGTGGGGAAGACAACAATAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATCCATCATTTAGTTCAGTTGTTATGGCTACAATCACCGATTCTCCAGATGTGGAAAAAATCCAAGGCCAAATTGCTGATGCCTTGGATATGAAATTTAACAAGGAGTCCATAGAAGGAAGAGCAACACAATTACGGAAAAGGATAACCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGTAGACTTGATTTGGCAGAAGTGGGGATTCCTTTTGGTGATGACCACAAAGGATGCAAGTTAGTGGTGACATCCAGAGATCTTAATGTGTTGAACTGTGAAATGGGCACTCAGAAAGAATTTAGGCTTGAAGTTTTACATCAGGAGGATAGTTGGAAATTGTTTGAGGAAGTGGCAGGTGATATTGTTCAAGAATTAAATATAAAGCCAATTGCAGTAGAAATAGCCAAATGTTGTACTGGCTTGCCTCTTTTGATAGTTCCTATGGCGAAGGCTTTGAGAAAAAAAGATGCCTCTGCTTGGAAAGATGCCTTAAATCAATTAAAGAGATTTGATCAACAAGGTTTGCATAAGAAAGTCTACTCTACCTTTGAGTTGAGTTATAATTGGTTAGAAAGGGAAGACCTGAAGTCACTCTTCCGATTCATCGGTTCATTTGGACTGGACCATATCCACACTGAAATATTGTTTCAATGTTATTGGAGGTCGGGGTTTTGTGAACATCTTCAGACATTGACAGAGGCTCGAAATCGATATGTCAACTTAATAAATGACCTTAGGGCTGCTTCATTGTTACTTGAACGTGAAAGGGGTCGAGTGAGAATGCATGAAGTTGTACGTGATGTAGCTAAATCAATTGCATATAGTTTTCATCCTACTTATTCTGTGAAAAGATACACTGAAGTAAAACTATGGCCAAAGATAGATCAGCTTCGAAAGTGTCATCAAATCATTCTGCCATGGTCTTATATTAATGAACTTCCTGAGATGTTGGAGTGTCCGGAGTTGAAGCTGCTTCTACTTCATAATATAGATGACAGTTTGAAAGTGTCTGATGATTTTTTCTCTGGGATGAGAGATCTAACAGTTCTTCATTTATATGGAATGATGTTCATCCCTTCCCCACCTCTATCTCTCTCTCTCTTGACAAACCTTCAAACGTTGGTTCTGGCTGGATGTGAGTTAGAAGATATTTCAATAGTAGTGGAACTGAAAAGTTTAGAGATTCTCAGCTTTGAAAGATCTGACATTATACAGCTCCCAAAAGAAATAGGACAACTAACTAATCTTCGAATGCTGAATTTAACCAACTGCTGTGGACTTCGATTCATTCCTGCAAATCTTATTTCAAGTTTAACATGTTTGGAAGAGTTGTACATGGGCAATTGCTTTATCCAGTGGGATGTCAAGGGAAGCAAAGATCACAGCAACAATGCAAGTCTGGAAGAGCTAAGCAATTTGTCTCATCTAACAACTTTGGACATAATGATTCAAGATGCTTCAGTTTGGCCAAGGGACTTGCAGGTCTTTGAAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGGAATGGCCTTTGGGATTGGCTGGAGGTGCTTCAGAAATTTCAAGAATACTTAAGCTGGAAGAGAGTAACAGTACAAGAATTCTTTCTGATCATGGGTTTGACTTCTTGTTGAATTCAACCGAGGATTTGTGCCTGGGAAAATTACAGTGTCCTGGAGATGTCCTTTACGAGTTGAATAGGGAAGGTTTTTCACAATTAAAACATTTGTGCATTGAAGAAAGTTCTGAACTGAAATACATCGTTAACTTAATAGGGTTCATTCATCCCTATCCTGCCTTCCCCAACTTGGAGACTTTGACTCTTCGAAATCTGTTTGATTTTGAAGAAATATACCATGCCCCAATTCCAATTCAATCTTTTGCCAAGCTGGAATTTATTGAAGTCAAAGGTTGTGATAAGTTGAAGCATCTGTTTTGGTATTCCCTGGTTAGAGACCTTCCTCAACTTCTTGAAATAAAAGTTACTGATTGCGCACTACTCACACAAATCATTGCTGAACAAACATCCAATACTGATAAAGAAATTGACAATATTATGTTCCCCAAGTTGCGTTCTCTTACACTTGAATGTTTACCTAGTCTCATTAGTTTCTGTTCCGCACCACTGACAGCTGATGCTAGTTTCAAAAAACGTGTTGAGAAGTGTGATGACTCACAACTCATACCGGTGGCACTAATTGATCAAAAGCTTGGAATGCCCCACCTTGAAACCCTGAAGCTGTCTAAGATCAATTCTTGGAAATTATGGGATGGCAAACTCTCGAGCTATTCTGCTATTCCAAACTTGACAAGCTTGACAATTGACAAATGTCATAACATAGCATACATATTCTCATCCTCAGTGGCAAGAGCACTAGTAACCCTGCAATATCTTGAGATTAGTAACTGCCAAATGTTGGAGGATGTATTTTCCTTTGATGCAAAGTTGGGTAATCATTCTTCAGCTCAGGAGCCTCTCTCTAATGAGGATGTTGTATTCCCGAACTTAGTGACATTGGTAATCTCTCAAATGGATAACTTGAAGTCAGTATGGCATAATCAACTTGCTCCAAATTCCTTCTGTAAATTGAAGCATCTGGAAACTAAATTCTGCAATAAATTATTAAATGTAATCCCATCTTATGTTTTTGAAAACTTGCTCAATCTAGAGACAATAATTGTAACCAATTGTCCTTCACTGGAAGTTCTTTTTGAAATACAAGATTTAAAAACAGGAGCTAGTAGCCAGATGGGGCTGGAAATGCAGATGAGGAATCTTACTTTGGAGCATTTGCCAATGCTTAAACACATATGGAGTAGAAATTCCTTTGGAAGATTAAGATTTCAAAACCTAGGGCAATTGAAAGTCGTTGAATGTGAAAGCCTTGATCATATTTTTCCATTCTTTGTGGCCAAAACACTTCCATATCTCCAAGTACTTCATATTGAAGAATGCGGCGTAGAGAATATTATAGCACAGGATGAAATGGCTGACACTGTTCCAATACTTGTTTTCCCAAAATTAACATCTTTGAGTCTTCGAAGTTTAACACAACTTAGAAGCTTCTGCCATGGATTACACACCTTGGGTGCGCCTGTTTTAAGAGATTTGGATGTGTATCATTGTGATCAACTAGAAGTATTTGTGCCAAAAACTTTAAACTACCCAGGAAATACCGCAGTTTATCCACCAGCCCTACTGTCAATTGAAAAGGTTGTCCCAAACCTAAGGGAGCTTATTCTGAACGGAAGGGATGTCACCATGTTATGCAATGGTCAACTTAATCACAGGTCTATCTACACAGTAAAAGATCTTCGCTTGCGATGTTTTCACAATGAAACCGACATATTTCCATCAGGTTTCCTCCAAAGATTTATCAATCTTGAAAGTCTTATGGTGACTTGCAGTTCCTTCAGAGAGATTTTCTCAAGTCGAAGCTTTGGTACTGGACATTCTGAAACAACAATGAAGTTGAGAAGGCTAGTACTTGTTGAATTACATAGCCTTCAGTTTATATTTGAAGACAAATATGAGATGCAGTTTGCTGTTCAAAATTTTGAAGTATATAAATGTTCGATACTTGGGAATATATTTCCATCCTCTGTGCGATTTGAGAATTTAGAGAGAGTGAGAGTGGCCTTTTGTGTTGGATTGGAAAATATTATGTTATCTTCAATTGCTAATAATTTACCTAAACTTCGGAGATTAATTATAGATAATTGTGAAACAATTAAAGTAGTAGTTGCAAGTGATAAAGAAAATGATGCTGGCGAGCTAGCTTTTGTGAAACTGGAGTATTTGCGATTGTATAACTTGCCACAGTTAAAAAGTTTTTACAGGGGAGCATACCGCCTCAATTTTCCAATGCTGCAGAAGTTATTTGTTGGAAAATGTGACATGATAGAAACTTTCTCATATGGGGTGTTGAACGCACCAAAGCTCAGAGAAGTTTATACGACTACTAGTTCAAAAGGTCCATGGCGTTGGAGTGGTGACCTTAATACTACAATAAAAAAATATTTTTCTGAAACTGTAATGTATTCAACTTTGATTATCTCCAATCATAATTCATCTCTTATGGTTTGCATTCTTTAA 4710 0.3807 MDVIISVSAKIAEYMVVPIGRQFGYILYYKGNLVRIETDVQNLEGTKYSVQHTVDEARRNGEEIEIIVQNWLNKVDSTVAEAKKLINTESHAKAQCSMGHFPNLCTRHQLSRKTKKMIQKISEVLAEGKFDKISYRATSQVTVTPFGRGYKALDSRTSMLSEIMLALKNPNIFVIGVYGMGGVGKTTIVKELAWQAENDPSFSSVVMATITDSPDVEKIQGQIADALDMKFNKESIEGRATQLRKRITKEKSILVILDDIWGRLDLAEVGIPFGDDHKGCKLVVTSRDLNVLNCEMGTQKEFRLEVLHQEDSWKLFEEVAGDIVQELNIKPIAVEIAKCCTGLPLLIVPMAKALRKKDASAWKDALNQLKRFDQQGLHKKVYSTFELSYNWLEREDLKSLFRFIGSFGLDHIHTEILFQCYWRSGFCEHLQTLTEARNRYVNLINDLRAASLLLERERGRVRMHEVVRDVAKSIAYSFHPTYSVKRYTEVKLWPKIDQLRKCHQIILPWSYINELPEMLECPELKLLLLHNIDDSLKVSDDFFSGMRDLTVLHLYGMMFIPSPPLSLSLLTNLQTLVLAGCELEDISIVVELKSLEILSFERSDIIQLPKEIGQLTNLRMLNLTNCCGLRFIPANLISSLTCLEELYMGNCFIQWDVKGSKDHSNNASLEELSNLSHLTTLDIMIQDASVWPRDLQVFEKLERYNIFVGDMWEWPLGLAGGASEISRILKLEESNSTRILSDHGFDFLLNSTEDLCLGKLQCPGDVLYELNREGFSQLKHLCIEESSELKYIVNLIGFIHPYPAFPNLETLTLRNLFDFEEIYHAPIPIQSFAKLEFIEVKGCDKLKHLFWYSLVRDLPQLLEIKVTDCALLTQIIAEQTSNTDKEIDNIMFPKLRSLTLECLPSLISFCSAPLTADASFKKRVEKCDDSQLIPVALIDQKLGMPHLETLKLSKINSWKLWDGKLSSYSAIPNLTSLTIDKCHNIAYIFSSSVARALVTLQYLEISNCQMLEDVFSFDAKLGNHSSAQEPLSNEDVVFPNLVTLVISQMDNLKSVWHNQLAPNSFCKLKHLETKFCNKLLNVIPSYVFENLLNLETIIVTNCPSLEVLFEIQDLKTGASSQMGLEMQMRNLTLEHLPMLKHIWSRNSFGRLRFQNLGQLKVVECESLDHIFPFFVAKTLPYLQVLHIEECGVENIIAQDEMADTVPILVFPKLTSLSLRSLTQLRSFCHGLHTLGAPVLRDLDVYHCDQLEVFVPKTLNYPGNTAVYPPALLSIEKVVPNLRELILNGRDVTMLCNGQLNHRSIYTVKDLRLRCFHNETDIFPSGFLQRFINLESLMVTCSSFREIFSSRSFGTGHSETTMKLRRLVLVELHSLQFIFEDKYEMQFAVQNFEVYKCSILGNIFPSSVRFENLERVRVAFCVGLENIMLSSIANNLPKLRRLIIDNCETIKVVVASDKENDAGELAFVKLEYLRLYNLPQLKSFYRGAYRLNFPMLQKLFVGKCDMIETFSYGVLNAPKLREVYTTTSSKGPWRWSGDLNTTIKKYFSETVMYSTLIISNHNSSLMVCIL 1569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02835 1569 SUPERFAMILY RNI-like 772 1013 - -
Trre11g02835 1569 Pfam NB-ARC domain 165 389 IPR002182 GO:0043531
Trre11g02835 1569 SUPERFAMILY L domain-like 462 1164 - -
Trre11g02835 1569 PRINTS Disease resistance protein signature 340 354 - -
Trre11g02835 1569 PRINTS Disease resistance protein signature 247 261 - -
Trre11g02835 1569 PRINTS Disease resistance protein signature 613 629 - -
Trre11g02835 1569 PRINTS Disease resistance protein signature 174 189 - -
Trre11g02835 1569 Gene3D - 306 393 IPR042197 -
Trre11g02835 1569 Gene3D Ribonuclease Inhibitor 1388 1550 IPR032675 -
Trre11g02835 1569 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1093 1254 - -
Trre11g02835 1569 Coils Coil 430 450 - -
Trre11g02835 1569 Gene3D - 145 305 IPR027417 -
Trre11g02835 1569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 404 IPR027417 -
Trre11g02835 1569 SUPERFAMILY RNI-like 1307 1522 - -
Trre11g02835 1569 Gene3D Ribonuclease Inhibitor 922 1085 IPR032675 -
Trre11g02835 1569 Gene3D Ribonuclease Inhibitor 1107 1336 IPR032675 -
Trre11g02835 1569 SUPERFAMILY RNI-like 1131 1341 - -
Trre11g02835 1569 FunFam Probable disease resistance protein At1g61300 148 301 - -
Trre11g02835 1569 Gene3D Ribonuclease Inhibitor 501 914 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02835 Trre-Chr11 37578826 37584509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02835 162 493 WRKY Transcription Factor Family AT5G45050 25.073 1.45e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02835 - - mtr:25487104 1915.2