Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02834 ATGGATTTTATTATTTCAGTTGGTGCTAAAATTTCTGAATTTATGGTTGCACCTATTGGACGTCAATTTGGTTACATACTGTACTACAAGGGCAACCTTGTAAGGATGGCAACTGCTGTCCAAAATCTGGAGGGAACAAAAGACCGTGTGCAACACACTGTTGATGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAGAACTGGCTGAACAAAGTGGACAGTACTGTTGCTGAAGCAAAGAAACTTATTAACACTGAAAGCCATGCCAAAGCTCAATGTTCTATGGGACACTTTCCTAATCTGTACACAAGGCACCAGCTGAGCAGGAAGACAAAAAAGATGATACAAAAGATTTCTGAAGTCCTAGCAGAAGGAAAATTTGACAGAATTTCTTATCGTGTTGCTTCTCAAGTCACAGCCACACCGTTCGGTAGAAGTTATGAGGCCCTGCACTCCAGAACGTCAATGTTGAATGATATTATGTTGGCACTGAAGAATCCTAACATCTTCATTACTGGGGTGTATGGGATGGGTGGAGTGGGCAAGACTACACTAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATGGGTCATTTAGTGCTGTAGCTATGGCTACTATCACTGATTCTCCAGATGTGGAAAAAATTCAAGGTCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAGCACAATTACGGGAAAGAATAAACAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGGAGATTTAATTTGACAGACCTGGGGGTTCCTTTTGGTAATGATCACAAAGGATGCAAGTTGGTGGTAACATCCAGAGATCTTAATGTGTTGAACTGTGAGATTGGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGATGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCAGAAAAAGTGGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGCTTTGAGGAAAAAACATGTCTCTGCTTGGAAGGATGCCTTAAATGAATTAGAGAGATTTGATCAAGAAGGGTTGCATAAGAAAGTATACTCTACTCTGGAATTGAGTTATAATTTTTTGGAGAGTGAAGACCTGAAGTTGCTATTCTTATTCATCGGTTCATCTGGAGTAGACCATATCCATACTGGACAACTATTTTCATGTTCTTGGGGGTTTGGCTTATATAGGCATGCTCGCACATTGACAGATGCAAGAAATAGATGCTTCAAATTGATAAACGACCTCAAGGCCTCTTCGTTGTTACTTGAGTCTGAAACTGAATTAGTTAGAATGCATGATGTTGTTAGAGAGGTGGCTAAATCAATTACATCTAGGCTTCATCCTACCTTTGGCGTGCAAAGGTTTACTGTACTGAAAAAATGGCCAAAGATAGATCAACTTCAAAAGTTAGATGCAATTGTCGTGCCTTGGTCTTATATTCATGAGCTTCCTGAAAAGTTAGATTGCCCAGAGTTGAAACTACTTGTACTTCAAACAATAGGTGACCATTTGAAAATCCCAGATGAGTTTTTTTCTGTGATGAGAGAACTAAAGGTTCTTCAATTATATGGAATGATGTTGACACCTCCACCTCCTTCCTTCCGTCTTTTGACAAACATTCAATCGTTGGCTCTTTCTGGATGTGTGTTAGGAGACATATCAATAGTTTCAGAGCTGAAAAGTTTAGAGATTCTCAGCCTTGAAAAATCTGATCTTATTGACCTTCCAAAAGAAATCGGACAACTAACCAATCTTCGGATGTTGAATCTAACCAACTGCTCTCGACTCAAATTCATTCCTGCAAATCTTATTTCAAGCTTGACGTGCTTGGAAGAGTTGAACATGGGGAATTGCTTTATCCAGTGGAATATCAAGGGAAGTAGAGATGAAAGCAACAATGCAAGTCTAGATGAGCTCAGGAATTTGTCTCATCTAACAACTTTAGACATAATGATTCAGGATACTACAGTTTGGCCAAGTGACTTGCAGATCTTTGCAAAGCTTGAAAGATACAACATATTTATTGGTGACATGTGGAAATGGTCTTTGCTAATGGCTGGAGGTGCTTCTGAATCTTCAAGAACACTTAAGCTCACGGAGACTGATAGTTCAAGCATTGTTTTGGACGCTGGGTTTAACTTCTTGTTGAATTCAGCCGAGGACATGTGCCTAGCCAAAATACAGTGTGGTAAAGATGTCCTTTCTGAACTGAACAAGGAAGGTTTTCCACAGTTAAAGCACTTATGCATTCAAGACAGTGCTGAGCTGAAGTTCATCATTAACTCAATGGGGTGGATTTATCCTTATCCTGCTTTCCTCAGCTTAGAGACTTTGGTGCTTCAAAATCTGTTTAATTTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTCTTACCAAATTAAAATCTATTGAAGTCAAAGAAATCGTAGCTGTGCAAACATCTGAAGCTGATAAAGAAATCAACAAGCTTATGTTCCCCAAGTTGCGTTCTCTTGAACTTGAACGTTTGCCGAGTCTCGTTAGTTTCTGTTCTGTGCCATTGGCAGCTGGACAATCCACACCTTTGGGACTAATTGATAAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTGTCTAATATCAACTGTATGAAATTGTGGGATGACAACCTTCCAGTAGCTATAAAGCTTGTAAACCTGCATTATCTTGGGATTAGTAATTGTTCAATGATGGAGGAGATATTTGTCTTGGATAGAAAGTTAGGTAGTCTTCCTTCTCAGAAACTATTGTCTGATGATGAGGTTATATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGAACACTTGAAGACAGTTTGGCACAATCAACTAGCTCCAAATTCCTTCTGCAAACTGAAGCAGTTGAAAATTGAATCCTGCAATAAATTATCAAATGTATTACCATCCTATGTGCTTGATAAATTACAAAATTTGGAGACAGTGACTGTAAGTGATTGTCATGCATTGGAAGTTGTATTTGAAACTCAAGGTCTAAAAGTAGATGGTAGTAGACAAACGGGGCTTGAAATGAAATTGGAAACTGTCACTTTGAATCATTTACCCATGCTTAAACACATATGGAGTGGGAATCCTAATAAAATTTTGAACTTTCAAAACCTCTGCCAATTGAAGGTTATTGGATGCCAAAACCTTAATCATGTTTTTCCTCTCTCTGTGGCTAAAGAGCTTCAGCGTCTCCAAGTGCTTCATATAGAAGAATGTGGCATAGAGATTATTGTAGCACAAGATGGAATCGCTGACACAACTCCAATGCTTAATTTTCCAAAATTAACAACTTTGTGTTTTCGAGAATTGACACAACTTCGAAGCTTCTATCATGTATCATATACTTTGAATTGTCCTGTTTTAAGAGATGTTGATGTGTTTCACTGTGACAATCTCATACTATTCCAGCCAAAGTCTTTAGATAACCGTGGCAATGTTTCAGTTGATACATTACCCCTTCTCTCTATTGAAAAGGTACTTACATCTCAATACTCCTCCCACAAATGTCATTGA 3648 0.3876 MDFIISVGAKISEFMVAPIGRQFGYILYYKGNLVRMATAVQNLEGTKDRVQHTVDEARRNGEEIENIVQNWLNKVDSTVAEAKKLINTESHAKAQCSMGHFPNLYTRHQLSRKTKKMIQKISEVLAEGKFDRISYRVASQVTATPFGRSYEALHSRTSMLNDIMLALKNPNIFITGVYGMGGVGKTTLVKELAWQAENDGSFSAVAMATITDSPDVEKIQGQIADALDLKFNKETKEGRAAQLRERINKEKSILVILDDIWGRFNLTDLGVPFGNDHKGCKLVVTSRDLNVLNCEIGTQKEFRLEVLLEDDSWKLFEKMAGDVVQEFNIKPIAEKVAKCCAGLPLLIVTVAKALRKKHVSAWKDALNELERFDQEGLHKKVYSTLELSYNFLESEDLKLLFLFIGSSGVDHIHTGQLFSCSWGFGLYRHARTLTDARNRCFKLINDLKASSLLLESETELVRMHDVVREVAKSITSRLHPTFGVQRFTVLKKWPKIDQLQKLDAIVVPWSYIHELPEKLDCPELKLLVLQTIGDHLKIPDEFFSVMRELKVLQLYGMMLTPPPPSFRLLTNIQSLALSGCVLGDISIVSELKSLEILSLEKSDLIDLPKEIGQLTNLRMLNLTNCSRLKFIPANLISSLTCLEELNMGNCFIQWNIKGSRDESNNASLDELRNLSHLTTLDIMIQDTTVWPSDLQIFAKLERYNIFIGDMWKWSLLMAGGASESSRTLKLTETDSSSIVLDAGFNFLLNSAEDMCLAKIQCGKDVLSELNKEGFPQLKHLCIQDSAELKFIINSMGWIYPYPAFLSLETLVLQNLFNLEEICHGPIPIQSLTKLKSIEVKEIVAVQTSEADKEINKLMFPKLRSLELERLPSLVSFCSVPLAAGQSTPLGLIDKKVGMPHLELLKLSNINCMKLWDDNLPVAIKLVNLHYLGISNCSMMEEIFVLDRKLGSLPSQKLLSDDEVIFPNLETLEISHMEHLKTVWHNQLAPNSFCKLKQLKIESCNKLSNVLPSYVLDKLQNLETVTVSDCHALEVVFETQGLKVDGSRQTGLEMKLETVTLNHLPMLKHIWSGNPNKILNFQNLCQLKVIGCQNLNHVFPLSVAKELQRLQVLHIEECGIEIIVAQDGIADTTPMLNFPKLTTLCFRELTQLRSFYHVSYTLNCPVLRDVDVFHCDNLILFQPKSLDNRGNVSVDTLPLLSIEKVLTSQYSSHKCH 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02834 1215 Coils Coil 40 74 - -
Trre11g02834 1215 Gene3D Ribonuclease Inhibitor 481 712 IPR032675 -
Trre11g02834 1215 FunFam Probable disease resistance protein At1g61300 139 299 - -
Trre11g02834 1215 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1019 1180 - -
Trre11g02834 1215 Gene3D Ribonuclease Inhibitor 1052 1202 IPR032675 -
Trre11g02834 1215 Gene3D - 132 302 IPR027417 -
Trre11g02834 1215 SUPERFAMILY L domain-like 462 1174 - -
Trre11g02834 1215 Gene3D - 306 393 IPR042197 -
Trre11g02834 1215 Pfam NB-ARC domain 162 390 IPR002182 GO:0043531
Trre11g02834 1215 PRINTS Disease resistance protein signature 247 261 - -
Trre11g02834 1215 PRINTS Disease resistance protein signature 612 628 - -
Trre11g02834 1215 PRINTS Disease resistance protein signature 340 354 - -
Trre11g02834 1215 PRINTS Disease resistance protein signature 174 189 - -
Trre11g02834 1215 SMART AAA_5 171 302 IPR003593 GO:0016887
Trre11g02834 1215 Gene3D Ribonuclease Inhibitor 845 1043 IPR032675 -
Trre11g02834 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02834 Trre-Chr11 37558029 37562500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02834 171 477 WRKY Transcription Factor Family AT5G45050 28.037 2.13e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02834 - - mtr:120578394 1625.91