Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02824 ATGGATACATTAGGTGCATTGGCTCTTGCGACTGAAAAACCAACTAAGGAATTAATGGATCAAAAACCTGTTGGTATAACAAAACCTCTTATTACTAACATCATGTGGAGGAATCTTTTGTCACAAGCTATCTACCAAATAGTAATTTTGTTGACACTTCAATTCAAAGGTGAAACTATTTTTGGTGTGACATCAAAGGTAAATGACACATTGATTTTCAATACATTTGTTCTTTGTCAAGTGTTTAACGAGTTTAATGCAAGAAAGTTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGTAAGTTGTTTTTGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTTGTTATGGTTGAGTTTTTGAAGAAATTTGCTGATATAGAGAGGTTGAATTGGAGAGAATGGATTATTTGTATTGGTTTTGGTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGTTGATACCTGTCTCAGATAAACCATTACTTGATTTTTTGAGTATGAAGAAGACTTTATGA 525 0.3352 MDTLGALALATEKPTKELMDQKPVGITKPLITNIMWRNLLSQAIYQIVILLTLQFKGETIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGVTLVLQVVMVEFLKKFADIERLNWREWIICIGFGAVSWPIGFVVKLIPVSDKPLLDFLSMKKTL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02824 174 Gene3D - 1 161 - -
Trre11g02824 174 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 159 IPR023298 -
Trre11g02824 174 Pfam Cation transporting ATPase, C-terminus 1 157 IPR006068 -
Trre11g02824 174 PANTHER CATION TRANSPORTING ATPASE 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02824 Trre-Chr11 37301799 37302323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02824 1 174 Primary Pumps ATPases AT3G63380 64.368 5.67e-76 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02824 K01537 - gmx:100793918 278.87