Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02822 ATGCTGAATGAGATTATGGTGGACTTGAAGAATCCCAACATCTTCATTGTTGGGGTCTACGGGATGGGTGGTGTGGGGAAGACTACACTTGTGAAAGAGTTAGCATGGCAAGCAGAGAATGATAGGTTATTCAGTGTTGTAGCTATTGCTACTATAACTGTTTCTCCTGTTTTGGAAAAAATTCAAGGCCAAATTGCTTATGCTTTGGGTATGAAATTTGATAACGAGATAGAAGAAGGAAGAGCAATGCAGTTACGTCAAAGGATAAGCAATGAGAAGAGTATTCTCATTATTCTTGATGACATTTGGGGTAAACTTGATTTGACACAAGTGGGGATTCCTTTTGGTGATGATCACAAAGGATGCAAGTTGGTGGTGACATCCAGATATCTTAATGTGTTGAACTCTAACATGAGCATTCAGAAAGAATTCAGACTTGATGTTTTAAATGATGAAGATAGCTGGGAATTGTTTGAGAAAACGGCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGCTGAAAAAGTGGCCAGACGTTGTGTTGGTTTTCCCCTTTTGATTGTTACCGTTGCAACGGCTTTGAGGAAAAAAAATATCTATGACTGGCAAACCAAATTGAATGAGTTAGAGAGACTTGATCAAGAAGAGCTACATGAGAAAATCCATTCTACTTTGGAATTGAGTTATAATTGGCTAGAAAGTGAAGAGCTAAAGTCACTGTTCTCATTCATTGGTTCATTTGGACTAGAGCGCCTGCACACTGAAGATTTGTTTTCATGTTATTGGGGGTTAGGCTTATATAGACACTCTCACTCATTGACATGTGCAAGAACCAGATTCTACAAATTAATAAACGACCTCAAGGCCTCTTCGTTGTTACTTGAGTCTGAACCTGAAATGATTAGAATTCATGATGTTGTTAGAGATCTGGCTAAATCAATTTCATCTAGGACTCGGCCAACCTATGTTGAGAAAATGTACACTTTGGTAAAACAGTTTCCAGATATGGATGAGCTTCAAAAATACCATCAAATCATTGTGCCTGGGTCATATATTTACAAGCTTCCTGAGAAGTTGGATTGCCCAGAGTTGAAGCTACTCGTCATTGTTTTATGTGGAATGATGTTAACCCCTTCTCTACCACCATCTTTGTGTCTCTTGACAAAAATCCAATCACTGGATATGTCTGAATGTGTGTTGGAAGACATATCAATAGTTGCAGAACTAAAAAGTTTAGAGATTCTCATCCTTGAAAGATCAGATATTAAAGAGCTCCCAAAAGAATTAGGGCAACTAACTAATCTTCGAATGCTGAAATTAACCAACTGTTGTGGACTGAGATTCATTCCTGCAAATCTTATTTCAAGCTTAACCTGCTTAGAAGAGTTGTACATGGGGAATTGCTTTATCAATTGGGCTGTCAAGGGAAGGACAGATCAAAGCAAAAATGCAAGTCTAGATGAGTTGGGGAATTTGTCTCATCTAACTGCTTTAGACATAACAATTCAAGATGCTTCAGTTTGGCCAAGGAACTTGCAGGTCTTTGCAAAGCTTGAAAGATACAACATATATGTAGGTGATATGTGGAAATGGTCTTTGAAGTGGTCTGGAAATGCTTCTGAAACTTCAAGAAATCTTAAGCTCACCGACAATAGGAGTTCAAGCATTCTTATGGATCGTGGGTTTAACTTCTTGTTAAATTCAGCTGAGAACATGTGCCTTAATAAAATACAATGTGTTAGAAATGTCCTTTATGAACTGAATAGAGAAGGTTTTCCTCAAGTAAAGCATTTGTGCATTCAAGACAGTAGTGAACTACAGTATATCGTCAGCTCAATGGGGTTGGTTCATCCTTATCCTGCTTTACCCAACTTAGAGACTTTGTCTCTTCAAAATCTATTTAGTCTGGAAGAAATATGCCATGGCCCAATTCCAATTCATTCTTTTACCAAACTAAAATATTTTGAAGTTAAAGGTTGCCACAAGTTGACAAATTTGTTATGGTATTCCCTTGTCAGAGACCTTCCTCAACTTGTTGAAATAAAAATTTCTGATTGCAAAATGATTACGGAAGTAATAGTTTTCCAAATATCTGAGGTTGATATTGAAATCAGCAAGATTATGTTCCCCAAGTTGCGCTCTCTCGAACTTCAGCATTTGCCAAGTCTTATTAGTTTCTGTTCCGTGCCATTGGCAGCGGATAAGCATCTCAAAAAGTGCATACCTGTGGCACTAATTGATCGAAAGGTTGAGATGCCTCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGAAAATTGTGGGATGACAACCTTCCAGATCATTCTTTCATTCAAAACTTGACAAGTTTGACAATTGAAAAATGTGTTAGCATAGCATACGCATTCTCGTCCTCAGTGGCTAGAGATCTTGTAAACTTGAAGCATCTTCAGATTAGTAATTGCCAGAGGCTGGAGGATATATTTCTCTCAGATGGAAATTTGGGCACTGTCTCCAACTCGGTTGTATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGAACACTTGAAATCATTATGGCACAATCAACTTGCTCCAAATTCCTTCTTCAAACTGAATCAGTTGACAATTGAATCCTGCGATAAATTATCAAATGTATTTCCATCTTATGTGCTTGATAAACTACAGAATCTGGAGAAACTGACTGTAACTGATTGTCCTACACTAGAAGTTGTATTCGAAACACAGAGTCTGCAAGTAGAAGGTGGTAGACAAACGAGGCTGGAAATGCAATTGGGAACTCTTATTTTGAAAAATTTACCAATGCTGAAACACATATGGCGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACCTTTGCATACTGAAAGTTGAGAAATGCCAAAGCCTTAATCATGTTTTTTCCCTTTCTTTTGCTAAAGAGCTTCAGCATCTCCAAGAGGTTTACATTAAAATGTGTGGCGTAGAAAGCATTGTAGCACGGGATGAAATGGATAACACAAGTCCAAATCCGATACTGATTTTCCCAGAATTAAAAACTTTGAGGTTTCTAGATTTGACACTACTTCAAAACTTCCACCATGAATTACATACCTTGGATTTTCCTGTTTTAAGAGATGTGAATGTGTTTCATTGTGACAAGCTCGTACTATTCAAGCCAGTGTCTCTAAACTACCAAGACATTGCCACAGCTGATATACCACCCCTTCTCTCAATTGAAAAGGCTGTCTCCAACACAACTAAGCTTACTCTGAATTGCAAGGATGTCACCATGTTATGCAATGGTCAACTTAATTATGAGCCTATCTACACAGTAAAAGATCTTCTCCTACGATGTTTTCATGATGCGTCTGACAAATTTCCATCTGGTTTCCTTCAAAGATTTATCAATCTTGAAAATCTTCAGGTGTCATGTAGTTCTTTCACAGAGGTTTTGTTTTGTGAAAGCTTTGGCACTGGACATTCTGAAACAACTATGAAGTTGAGAAGTCTAAAACTTCGTTTATTACCAAACCTCAAGTTTATATGTAAAGAAAAATCTGAGGGACAACTGGTTCTTCAAAATATGGAAAGTTTGCTAGTAATTTCATGCTCTTCACTGAAGAATATATTTCCATCCTCAACGGTATTTGAGAATTTACAGAAGTTGATGGTGAACGATTGTGATGGATTGGAAAATATTATGAAATCATCAACAGCTACCAGTTTACAAAAACTTAAAGAATTACACATATATGATTGTGAAGTAATAGAAGAAATAGTTGCAAGTGATGATGAGAATGATACTTCTGAACTAGCTTTTACGAAGTTGGAGTATCTGCGATTGAATAAGTTACCAAGGCTAAGAAGTTTTTGCAAGGGAAGACATGGATTCAGATTTCCACTACTGCAGAAGTTATTTGTAATAGATTGTCCCATGATGGAAACTTTCTCACATGGAGTGTTGAATATGCCAAGGATCAGAAAAGTACATGTAAATGCCTATGACAGATATGAATGGTATTGGAATGGTGACATAAATTCTACTATAAAAAAAATTGCAGAGGAAAAAAGGGTGTTATCGACATGTTTTGGGTGCAAGGCCAACCGGCAAATCGCTAATGGCACAAAGCCTTTACAAAATGACTTCTGTCTCTGGTTTTCTGTTATTTGCAAATTGCAAAGCTCACTCCTAAACTTTCCTCATAATATAAGAGCTGAATGCTTGATTCAGTGTGTATGTGATCAATTGTTAATTCTTGAGATTGAATTGGGTGAATTTAAAGGTATGCTACTTCAGAAGTTCTTGAGATTGTTTATTTGCTTTGGTGGTTTTTGA 4335 0.3709 MLNEIMVDLKNPNIFIVGVYGMGGVGKTTLVKELAWQAENDRLFSVVAIATITVSPVLEKIQGQIAYALGMKFDNEIEEGRAMQLRQRISNEKSILIILDDIWGKLDLTQVGIPFGDDHKGCKLVVTSRYLNVLNSNMSIQKEFRLDVLNDEDSWELFEKTAGDVVQDFNIKPIAEKVARRCVGFPLLIVTVATALRKKNIYDWQTKLNELERLDQEELHEKIHSTLELSYNWLESEELKSLFSFIGSFGLERLHTEDLFSCYWGLGLYRHSHSLTCARTRFYKLINDLKASSLLLESEPEMIRIHDVVRDLAKSISSRTRPTYVEKMYTLVKQFPDMDELQKYHQIIVPGSYIYKLPEKLDCPELKLLVIVLCGMMLTPSLPPSLCLLTKIQSLDMSECVLEDISIVAELKSLEILILERSDIKELPKELGQLTNLRMLKLTNCCGLRFIPANLISSLTCLEELYMGNCFINWAVKGRTDQSKNASLDELGNLSHLTALDITIQDASVWPRNLQVFAKLERYNIYVGDMWKWSLKWSGNASETSRNLKLTDNRSSSILMDRGFNFLLNSAENMCLNKIQCVRNVLYELNREGFPQVKHLCIQDSSELQYIVSSMGLVHPYPALPNLETLSLQNLFSLEEICHGPIPIHSFTKLKYFEVKGCHKLTNLLWYSLVRDLPQLVEIKISDCKMITEVIVFQISEVDIEISKIMFPKLRSLELQHLPSLISFCSVPLAADKHLKKCIPVALIDRKVEMPHLELLKLSNINSRKLWDDNLPDHSFIQNLTSLTIEKCVSIAYAFSSSVARDLVNLKHLQISNCQRLEDIFLSDGNLGTVSNSVVFPNLETLEISHMEHLKSLWHNQLAPNSFFKLNQLTIESCDKLSNVFPSYVLDKLQNLEKLTVTDCPTLEVVFETQSLQVEGGRQTRLEMQLGTLILKNLPMLKHIWRGNPNESFKFQNLCILKVEKCQSLNHVFSLSFAKELQHLQEVYIKMCGVESIVARDEMDNTSPNPILIFPELKTLRFLDLTLLQNFHHELHTLDFPVLRDVNVFHCDKLVLFKPVSLNYQDIATADIPPLLSIEKAVSNTTKLTLNCKDVTMLCNGQLNYEPIYTVKDLLLRCFHDASDKFPSGFLQRFINLENLQVSCSSFTEVLFCESFGTGHSETTMKLRSLKLRLLPNLKFICKEKSEGQLVLQNMESLLVISCSSLKNIFPSSTVFENLQKLMVNDCDGLENIMKSSTATSLQKLKELHIYDCEVIEEIVASDDENDTSELAFTKLEYLRLNKLPRLRSFCKGRHGFRFPLLQKLFVIDCPMMETFSHGVLNMPRIRKVHVNAYDRYEWYWNGDINSTIKKIAEEKRVLSTCFGCKANRQIANGTKPLQNDFCLWFSVICKLQSSLLNFPHNIRAECLIQCVCDQLLILEIELGEFKGMLLQKFLRLFICFGGF 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02822 1444 Pfam NB-ARC domain 9 232 IPR002182 GO:0043531
Trre11g02822 1444 Gene3D Ribonuclease Inhibitor 478 742 IPR032675 -
Trre11g02822 1444 Gene3D Ribonuclease Inhibitor 1078 1334 IPR032675 -
Trre11g02822 1444 SMART AAA_5 13 152 IPR003593 GO:0016887
Trre11g02822 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 246 IPR027417 -
Trre11g02822 1444 Gene3D - 148 235 IPR042197 -
Trre11g02822 1444 Gene3D Ribonuclease Inhibitor 340 477 IPR032675 -
Trre11g02822 1444 Gene3D Ribonuclease Inhibitor 749 1054 IPR032675 -
Trre11g02822 1444 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1082 1328 - -
Trre11g02822 1444 Gene3D - 1 142 IPR027417 -
Trre11g02822 1444 SUPERFAMILY RNI-like 1111 1334 - -
Trre11g02822 1444 SUPERFAMILY L domain-like 750 1063 - -
Trre11g02822 1444 SUPERFAMILY L domain-like 304 729 - -
Trre11g02822 1444 PRINTS Disease resistance protein signature 16 31 - -
Trre11g02822 1444 PRINTS Disease resistance protein signature 182 196 - -
Trre11g02822 1444 PRINTS Disease resistance protein signature 89 103 - -
Trre11g02822 1444 PRINTS Disease resistance protein signature 805 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02822 Trre-Chr11 37282238 37287487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02822 4 323 WRKY Transcription Factor Family AT5G45050 25.602 8.63e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02822 - - tpra:123895013 1822.36