Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02815 ATGCTCAAATTCCAATTCATCAAATTCTCTTCTTTTTCCCCTTCAAAACCCTCATTTCTCCCTCTTTCAATTTCCACTACAATTAAGTTAAAATCACAAATGGCTTCTTACTCTTCTTATTCTTCTTCTTCCTCTTCTTCCAAACTCTTGTTCCGTCAGCTTTTTGAAAAGGAATCATCTACTTACACTTACCTTCTTGCTGATGCTTCACATGCTGAAAAACCAGCACTTTTGATTGACCCTGTTGATAGGACAGTAGATAGAGACTTATCACTTATTCAAGAATTGGGTTTGAAGCTTGTGTATGCTCTGAATACACATGTACATGCTGATCATGTTACTGGGACTGGCCTCATCAAGAGCAAAGTTCCTGATGTAAAATCTGTTATTTCAAAAGCAAGTGGTGCAACAGCAGATATATATGTAGAGCAGGGTGATAAAATCCGTTTCGGCGATCTTTTTCTAGAGGTTCGTGCAACTCCCGGTCACACCTTAGGTTGCCTTACCTATGTTACAGGAGATGGACCTGATCAACCTCAACCTAGAATGGCATTCACCGGAGATACCCTATTAATACGCGGATGTGGAAGGACAGACTTTCAGGGTGGTAGTTCAGAGAATCTTTACAAATCAGTCCATTCACAGATATTTACATTGCCGAAAGATACATTACTCTATCCAGCTCATGACTACAAAGGATTCTCAGTAAGTACCGTCGGAGAGGAGATGCAGTATAATCCGCGCCTAACAAAAGATGAGGAAACTTTCAAGAACATCATGGCAAATCTTAACTTGTCATATCCAAAAATGATTGATGTAGCTGTTCCGGCTAATATGGTTTGTGGAATCCAATCCAAAACCGGCTGA 867 0.4002 MLKFQFIKFSSFSPSKPSFLPLSISTTIKLKSQMASYSSYSSSSSSSKLLFRQLFEKESSTYTYLLADASHAEKPALLIDPVDRTVDRDLSLIQELGLKLVYALNTHVHADHVTGTGLIKSKVPDVKSVISKASGATADIYVEQGDKIRFGDLFLEVRATPGHTLGCLTYVTGDGPDQPQPRMAFTGDTLLIRGCGRTDFQGGSSENLYKSVHSQIFTLPKDTLLYPAHDYKGFSVSTVGEEMQYNPRLTKDEETFKNIMANLNLSYPKMIDVAVPANMVCGIQSKTG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02815 288 SMART Lactamase_B_5a 60 229 IPR001279 -
Trre11g02815 288 Gene3D - 50 278 IPR036866 -
Trre11g02815 288 PANTHER PERSULFIDE DIOXYGENASE ETHE1 32 285 - -
Trre11g02815 288 FunFam Persulfide dioxygenase ETHE1, mitochondrial 46 283 - -
Trre11g02815 288 SUPERFAMILY Metallo-hydrolase/oxidoreductase 58 277 IPR036866 -
Trre11g02815 288 Pfam Metallo-beta-lactamase superfamily 60 229 IPR001279 -
Trre11g02815 288 CDD POD-like_MBL-fold 50 231 IPR044528 GO:0006749|GO:0050313
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02815 Trre-Chr11 37219271 37222335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02815 K17725 - sind:105165531 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02815 11 37219271 37222335 Trre11g02815 11 37219271 37222335 ECH