Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02810 ATGACCGAAAAAGACAAACTCGGAGCCTCATCCGGCCACCCTCCTCCGCCACAATCTCAACCCTTTCCACCTCAGTACGGTACTTTCCAAGGTGTCTCCAACTTCCCTCCTCCTCTTCCTCCTCACACCCACCAATACCCTGCCATCGGTTTCCCTCAACCCGTCCCCCCTCCCGGCTCCGACCCCTCCGCCCCTCCTCCTCCCTATTACCCTCATGGCTACCAAGCTTTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTTAGAGAAAGGCGACTTGGGTGTTGTGGTATTGGCTGTGGCTGGTGCCTGTTTGTAATGGGTTTCTTTCTCGCTGCTATTCCGTGGTATGTTGGGGCAATAATTGTTCTTTTTTCCAGAGTAGATTACCGAGAGAAACCTGGATACATTGCTTGTTTGATTGCCGCTATTGTGGCTACAATTGCGATTGTTCTTGGCGCAACAAATGTAGCAGATGACTGGTAA 486 0.5165 MTEKDKLGASSGHPPPPQSQPFPPQYGTFQGVSNFPPPLPPHTHQYPAIGFPQPVPPPGSDPSAPPPPYYPHGYQAFPGYAVAEGRPVRERRLGCCGIGCGWCLFVMGFFLAAIPWYVGAIIVLFSRVDYREKPGYIACLIAAIVATIAIVLGATNVADDW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02810 161 MobiDBLite consensus disorder prediction 1 70 - -
Trre11g02810 161 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 19 161 IPR044804 -
Trre11g02810 161 MobiDBLite consensus disorder prediction 34 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02810 Trre-Chr11 37147695 37151544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02810 19 161 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 35.567 3.89e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02810 - - gmx:100810998 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02810 11 37147695 37151544 Trre11g02810 11 37147695 37151544 ECH