Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02800 ATGCATGACTTTGTGAAACCTAAGTTGAGTCCCCTTTTCAAGCTATTGGGTACAGGACTTGCAAATTATGAAGGCGAGAAATGGCGGATCCATCGAAAGATTATCAATCCCGCTTTCTACTCCGAAAAATTAAAGATTATGTCACCCATATTTTTCCAATGTTGTGATGAAATGATTAGCAAATGGGAAGAAATGTGTTCAGATGGAAAATTTGAAATTGATGCATGGCCTTTCGTTCAAACTTTGACGTGTGATGTAATTTCTAGAACAGCATTTGGAAGCAATTATGAAGAAGGAAAAAGAATATTTGAACTTCTAAAAGAACAAGCTAAACTTATTATAAAATTACGCAATATTTACATTCCGGGATGGAGGTATCTCCCAACAACTACACACAGGAGGATGACAAAAATTGATAAAGATATGCAAGCATCACTAATGGCTATAATCAACAAAAGAAAGAAAGCAATGATGGCTGGTGAAGTCCTAAACAATGACTTATTGGGCATACTTTTGGAATCAAATAAAAAAGAAATACAAGAAAATGGAAACAATAAGAATGTTGGTATGAGTGACCAAGAAGTACTTGAGGAATGCAATGCATTCTACCTTGGAGGACAAGAATCCACATCAGTTCTACTTGTTTGGACAATGATTTTGTTGAGTAGATATCCTGATTGGCAAGCAAGTGCTAGGGAGGAAGTCTTGCAAGTTTTTGGCAATCAAATGCCAAACAATGATGGGATAAGTCGCCTAAAAATAGTGACAATGATTCTCTACGAGGTACTAAGGTTATATCCACCGGTAGTTTACTTCAACCGAGTAGCTCGCAAAGATGTAAAACTAGGAAACCTTTTCATACCAGCAGGAGCACATGTTTCCTTACCGATACTCTTGATTCATCACAATTGTGATCTTTGGGGTGACGATGCTACCGAATTCAATCCAGAAAGATTTTCTGATGGAATTGCAAAGGCAACAAAGGGACAAGTTATTTTTTTCCCATTTGGTTATGGTCCTAGAGTGTGCCTTGGGCAAAACTTTGCTTTATTAGAAGCAAAGATTATTTTGTCACAACTTCTACAACGTTTCTCATTTGAACTTTCACCTAGCTATGTTCATGCTCCAACAACTGTGTTCACTCTTAATCCAAAACATGGGGCTCAAATCATTTTCCACAAATTATAG 1188 0.3687 MHDFVKPKLSPLFKLLGTGLANYEGEKWRIHRKIINPAFYSEKLKIMSPIFFQCCDEMISKWEEMCSDGKFEIDAWPFVQTLTCDVISRTAFGSNYEEGKRIFELLKEQAKLIIKLRNIYIPGWRYLPTTTHRRMTKIDKDMQASLMAIINKRKKAMMAGEVLNNDLLGILLESNKKEIQENGNNKNVGMSDQEVLEECNAFYLGGQESTSVLLVWTMILLSRYPDWQASAREEVLQVFGNQMPNNDGISRLKIVTMILYEVLRLYPPVVYFNRVARKDVKLGNLFIPAGAHVSLPILLIHHNCDLWGDDATEFNPERFSDGIAKATKGQVIFFPFGYGPRVCLGQNFALLEAKIILSQLLQRFSFELSPSYVHAPTTVFTLNPKHGAQIIFHKL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02800 395 PRINTS P450 superfamily signature 205 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS P450 superfamily signature 334 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS P450 superfamily signature 257 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 336 345 IPR017972 GO:0005506|GO:0016705
Trre11g02800 395 Gene3D Cytochrome P450 2 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 388 - -
Trre11g02800 395 PRINTS E-class P450 group I signature 343 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS E-class P450 group I signature 214 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS E-class P450 group I signature 82 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS E-class P450 group I signature 194 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS E-class P450 group I signature 333 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 PRINTS E-class P450 group I signature 297 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 Pfam Cytochrome P450 16 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02800 395 SUPERFAMILY Cytochrome P450 10 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02800 Trre-Chr11 36837226 36839360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02800 1 395 Cytochrome P450 AT3G14690 56.533 4.63e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02800 - K17873 gmx:100809929 616.305