Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02798 ATGGCTACAACAATAATTCTCTTCACCTTGATAATACTTACTCTGACATGGGCATGGAGGATTTTGAATTGGGTATGGTTTAAGCCAAAGAAGCTTGAAAAATTACTAAGAGAACAAGGACTTAAAGGGAATTCATATAGATTTTTAGTAGGTGACATAAAAGATCTTCTTAAGATGCGAAAGGAAGCTACTTCTAGACCCATGAATCTTTCTGATGATATTGTTCCTCGTGTGTATACCTATATCCAACAAAGTGCTATAAAATATGGAAAGAATTCTTTTATATGGTTTGGACCAACACCAAGGGTTAATATCACAGATCCCGAACTAATTAAAGATGTACTTAACAAATACTACGACTTCCGAAAGCCTAATGTGAATCCGCTTATCAAGTTACTAGTTAATGGTCTTGTAAATCTCGAGGGAGAGCAGTGGAGCAAGCACAGAAAGATAATAAATCCTGCATTCCATTTAGAAAAATTGAAGATCATGTTACCGATATTCTTCAAAAGTTGCGATGATCTGATTAGCAAATGGGAGACAATGTTGTCATCAGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAAAACTTGGCAAGTGATGTTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGGAGAATATTTCAACTTCAAATCGAGCAAGCTGAACTTGCAAAAACAGTTATGATGAAAGTTTACATCCCTGGATTTAGGTTTCTACCCACTCCTACCCACAGGAGGATGAAGGAAATTGCCAGAGATGTTAAAGATTCGCTTACCGATATGATTAACAAGAGAGAGATGGCTTTAAAGGCCGGTGAAGCAACTAAGGACGATTTATTAGGAATACTTTTGGAATCAAATCACAAGGAAATGAAAGAAAACGACAACAATAAGAATGTCGGAATGAATCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAGCGCGTGCAAGGGAGGAAGTATTACAAGTCTTCGGCAACAAAAAACCAGATTTTGATGGCCTAAGTCATCTTAAGATTGTTACCATGATTTTGTATGAGGTTCTTAGGTTATACCCACCAGTAATCGCGTTAGCTCGAACTGCTCACAAAGATTTGAAACTTGGAAACCTAACAATACCGGCCGGAGTACAACTATTCTTATCAATCATTTTGGTTCACCATGACATAGAACTATGGGGTGACGATGCTACGGTGTTCAATCCAGAGAGATTTTCAGAAGGTGTTTTAAAAGCAACAAATGGAAAAAATGCATTTTTTCCATTTGGTGGGGGTCCTAGAATTTGCATTGGACAAAACTTTTCCATATTGGAAGCAAAGATAGCAATGGCAATGATATTACAACATTTTTCATTTGAACTTTCTCCAACCTATGCTCACGCCCCGGCTACAGTAATTACGCTTCAACCGCAATATGGTGCTCATATAATTCTACGAAAGTTGTAA 1545 0.3773 MATTIILFTLIILTLTWAWRILNWVWFKPKKLEKLLREQGLKGNSYRFLVGDIKDLLKMRKEATSRPMNLSDDIVPRVYTYIQQSAIKYGKNSFIWFGPTPRVNITDPELIKDVLNKYYDFRKPNVNPLIKLLVNGLVNLEGEQWSKHRKIINPAFHLEKLKIMLPIFFKSCDDLISKWETMLSSDGSCEMDVWPFLQNLASDVISRTAFGSSYEEGRRIFQLQIEQAELAKTVMMKVYIPGFRFLPTPTHRRMKEIARDVKDSLTDMINKREMALKAGEATKDDLLGILLESNHKEMKENDNNKNVGMNLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLQVFGNKKPDFDGLSHLKIVTMILYEVLRLYPPVIALARTAHKDLKLGNLTIPAGVQLFLSIILVHHDIELWGDDATVFNPERFSEGVLKATNGKNAFFPFGGGPRICIGQNFSILEAKIAMAMILQHFSFELSPTYAHAPATVITLQPQYGAHIILRKL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02798 514 Pfam Cytochrome P450 79 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 507 - -
Trre11g02798 514 FunFam Cytochrome P450 734A1 26 514 - -
Trre11g02798 514 SUPERFAMILY Cytochrome P450 76 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 Gene3D Cytochrome P450 25 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02798 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Trre11g02798 514 CDD CYP72 81 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02798 Trre-Chr11 36832347 36835212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02798 1 514 Cytochrome P450 AT3G14690 58.447 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02798 - - gmx:100777623 813.142