Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02797 ATGTCAGATGGCAATTCTGTGTTGCTATCTGCAGAAGTGAGACAGTTTCATTCTTTTTCACTCCAAGAACAAGAAATTAAGGAAACACGCGCAACCTCTGAGAATCGACGCTATCATTCATTAAACTGCTATGATTCTCGTTTGATACGACTTTTGTCCATTGCAGTAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGACTTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGGTATTCTAA 249 0.4016 MSDGNSVLLSAEVRQFHSFSLQEQEIKETRATSENRRYHSLNCYDSRLIRLLSIAVETLAEFLSKATGLAVEWVQMPGMKVF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02797 82 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 28 80 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02797 Trre-Chr11 36824470 36829067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02797 45 80 Homeobox Transcription Factor Family AT1G52150 80.556 1.27e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02797 K09338 - gmx:100800697 58.9214