Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02788 ATGTTGACATGGTTATGGCTAAGACCCAAGAAGCTAGAAAAGTTGTTAAGAGAACAAGGCCTTAAAGGGAACCCGTATAAGCTATTAGTTGGAGACATGAAGGAATTTTTGAAGATGCAAATGGAAGCAAGATCCAAACCCATGCCTCTATCTGATGATATAGTCCCTCGTGTGTTTCCCTTGGGTTACCAAACTATTGCTAAACATGGAAAGAATTCTTTTATGTGGTTTGGACCAACACCAAGGGTGATCCTAACAGATCCTGAGTTAGTTAAAGAAGTTTTCAATAAGATCTATGACTTCCAAAAGCCTAATACAAATCCTCTTGTCAGAATACTAGCTACTGGTCTTATAATCCACGAGGGAGAAAAGTGGAATAAGCATAGAAAGATAATTAATCCTGCATTCCATTTAGAAAAATTGAAGATGATGTTACCAATATTCTTCAAAAGTTGCAATGATCTAATACGCAAATGGGAGGGAATGTTATCTTCAGATGGATCATGTGAAATTGATGTATGGCCTTCCATTCAAAATTTGTCCTGTGATGTTATTGCTCGAACAGCTTTTGGAAGTAGTTATGAAGAAGGAGTGAAAATATTTCAACTTCAAAAGGAGCAAGCTGCACTTACAATGGATGTTTTGATGAAGATTTATATCCCTGGTTTGAGATTTCTACCAACTACTACAAACAAAAGGTTGAAGGAAATTGACAGAGATATAACAGCTTCCTTGAGTGATATGATTAACAAGAGAGAAAGAGAAATAAAGGCAGGTGAAGCAACTAAGAATGACTTATTAGGCATTCTTCTTGAATCAAATCACAAGGAAATTGAAGAAAACAACAACAATAGAAATGTTGGTATGAATCTTGATGATGTAATCAAGGAATGCAAGCTTTTCTACCTTGCAGGGGAAGAAACAACTTCAGTTTTGCTTGTTTGGACAATTGTATTATTGAGTAGGTACCCTAATTGGCAAGCGCGTGCAAGGGAGGAAGTTCGAGAAGTTTTTGGAAACAAAAAACCAGATTTTGAAGGACTAAGTCATCTTAAAATTGTGACCATGATTTTGTATGAGGTTCTAAGGTTATATTCACCAGTAGTTGTGCTTCCAAGAGCTGTTTACAAAGATGTAAAAGTTGGAAACCTAACATTACCAGCTGGAGTACAAATTGCCTTACCAATAGCTTGGCTTCACCATGACTCTGAATTATGGGGTGATGATTCTAAAGTGTTCAATCCTGAGAGATTTTCTGGAGGAATTTCCAAAGCAACAAATGGTAGAATTTCATATTTTCCATTTGGTTGGGGTCCTAGAAGTTGCATTGGACAAAACTTTTCCATGTTGGAAGCAAAAATGGCAATAGCATTGATTTTGCAACATTTCTCATTTGAACTTTCTCCATCTTATGCTCATGCTCCAGCTTCAGTAATTACTCTTCAACCACAATATGGTGCTCATATTATTCTGCATAAAGTGGAAATATAA 1491 0.3635 MLTWLWLRPKKLEKLLREQGLKGNPYKLLVGDMKEFLKMQMEARSKPMPLSDDIVPRVFPLGYQTIAKHGKNSFMWFGPTPRVILTDPELVKEVFNKIYDFQKPNTNPLVRILATGLIIHEGEKWNKHRKIINPAFHLEKLKMMLPIFFKSCNDLIRKWEGMLSSDGSCEIDVWPSIQNLSCDVIARTAFGSSYEEGVKIFQLQKEQAALTMDVLMKIYIPGLRFLPTTTNKRLKEIDRDITASLSDMINKREREIKAGEATKNDLLGILLESNHKEIEENNNNRNVGMNLDDVIKECKLFYLAGEETTSVLLVWTIVLLSRYPNWQARAREEVREVFGNKKPDFEGLSHLKIVTMILYEVLRLYSPVVVLPRAVYKDVKVGNLTLPAGVQIALPIAWLHHDSELWGDDSKVFNPERFSGGISKATNGRISYFPFGWGPRSCIGQNFSMLEAKMAIALILQHFSFELSPSYAHAPASVITLQPQYGAHIILHKVEI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02788 496 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 FunFam Cytochrome P450 734A1 6 495 - -
Trre11g02788 496 SUPERFAMILY Cytochrome P450 62 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Trre11g02788 496 CDD CYP72 59 490 - -
Trre11g02788 496 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 487 - -
Trre11g02788 496 Gene3D Cytochrome P450 6 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g02788 496 Pfam Cytochrome P450 68 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02788 Trre-Chr11 36496340 36500786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02788 2 494 Cytochrome P450 AT3G14680 58.097 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02788 - - gmx:100777623 759.599