Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02729 ATGCTTTCTTCTTCACCACCATCTTCTTCTATAACCGCTTCATCTGAAACAAAATTAGGTTATTCTTCTATAAACCCTAAACCTTCATTCAAGAACCTTTCTCTATTCTCAAACAATCATTCTCTTCAAAGCATGACGAAAGTTTCAAAATGTTTCACTCAGTCTGATGCAATACCGGTTTCTGAATCTGATTATTCAATTGATTCTCTTGTTGTGGTTTCGTTTTATAAATTTGCGGATTTCCCTGACCATGCTGTTTTTCGTGATCCATTGAAGCAACTGTGTCAACAATTGCGTGTTTCAGGCGGTATCATTCTTGCGCCTGAAGGAATTAATGGAAGCCTATGTGGCACGAGGGAGTCGGTGGAGAAAGTTCTTGCATTTATTCAGGGTGATGATCGTCTGAAAGGTCTAAGACGTATTGAATCTCCTGTCAGTCCTGAGGAGGAGGCCATCCATCAGGAACATCATGGACACAGTGCCAGTTCTCCTCTTGCTGCTGGGGAGGATGTACCTTTCCGATGGGACCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACGGTATCACCTATGGAAAGGGTTGGAAAATATATTAGCCCAAAGGAATGGAATTCTTTGATTAGTGATCCGGATACAGTAGTAATTGATGTGCGGAATAACTATGAAACGAGAATAGGAAAGTTTAAAGGAGCAGCTGATCCATGTACGACGTCATTTCGTGAATTCCCATCTTGGGTGGAGGAACGTTTTGAGCTTGCCAGAACAGATGCTGAGCATCCAAAAGTAGATGTAAACCAGTCAGACCAAAATGCTGAAAAAGAAACAGAGAATCCGAAACAACATTTGCCACGTGTTGCAATGTATTGTACCGGAGGTATTCGATGTGAGAAAGCTTCAAGTTTACTTCTCAGCAAAGGATTTAAAGAGGTTTATCACATGGAAGGCGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGAGACAAAGTCTATGGGAAGGAGAGTGCTTTGTTTTCGATAAGCGAGTCTCCGTCGAGCATGGTTTGGCACCAGGAAATTTCAAGCTATGA 1086 0.419 MLSSSPPSSSITASSETKLGYSSINPKPSFKNLSLFSNNHSLQSMTKVSKCFTQSDAIPVSESDYSIDSLVVVSFYKFADFPDHAVFRDPLKQLCQQLRVSGGIILAPEGINGSLCGTRESVEKVLAFIQGDDRLKGLRRIESPVSPEEEAIHQEHHGHSASSPLAAGEDVPFRWDHVRVKLKKEIVTLGMPTVSPMERVGKYISPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAADPCTTSFREFPSWVEERFELARTDAEHPKVDVNQSDQNAEKETENPKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHMEGGILKYLEEVPERQSLWEGECFVFDKRVSVEHGLAPGNFKL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02729 361 MobiDBLite consensus disorder prediction 146 165 - -
Trre11g02729 361 Pfam Rhodanese-like domain 205 328 IPR001763 -
Trre11g02729 361 Gene3D - 60 187 - -
Trre11g02729 361 MobiDBLite consensus disorder prediction 263 285 - -
Trre11g02729 361 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 68 352 IPR020936 -
Trre11g02729 361 Hamap tRNA uridine(34) hydroxylase [trhO]. 68 360 IPR020936 -
Trre11g02729 361 SMART rhod_4 204 332 IPR001763 -
Trre11g02729 361 MobiDBLite consensus disorder prediction 1 21 - -
Trre11g02729 361 Gene3D - 188 360 IPR036873 -
Trre11g02729 361 ProSiteProfiles Rhodanese domain profile. 214 335 IPR001763 -
Trre11g02729 361 Pfam UPF0176 acylphosphatase like domain 71 186 IPR040503 -
Trre11g02729 361 CDD RHOD_YceA 201 328 - -
Trre11g02729 361 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 183 358 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02729 Trre-Chr11 35501764 35505944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02729 43 361 Sulfurtransferasese or Rhodanese AT2G40760 71.605 6.85e-164 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02729 - - psat:127118628 588.956