Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02707 ATGGAAGAAGAAACCACCGAATCAAGAAAACAAGCAAGGCTAGCAATTCTAGAATTAGCAAACATGATAAGTGTTCCAATGTCCCTAAACGCCGTCGTTCGTCTCAATGTTGCCGACGCAATTTGGGAAGGCGGTTCAAACGCGCCTCTTACTGCAGCTCAGATACTCGCGCGTGTAATTCCTGACGGTAGCGGTGATGCCGAGAATCTTCAACGCGTGCTTCGTATGCTCGCTAGCTATGGTGTTTTTGAGGAAGATATTGGTGGTGGTGAAAGGAAGTACTCGCTAACTGACGTTGGGAAAACGCTTGTGACTGATGAACAGGGGTTGTCGTATGGTGCTTATGTGCTCCAGCACCACCAGGATGCATTGATGAGAGCATGGCCATTGGTCCATGAAGCAGTTTTGGACCCTTCAAAGGAGCCATTTGAGAGAGCTAATGGAGAAGGAGCATATGACTATTACTTGAAAAAACCAGAGATGAATGAATTAATGTTGAAGGCTATGTCAGGGGTATCAGTGCCCTTCATGAAAGCCCTTTTGGAGGGCTATCATGGCTTTCAAAATGTTGAGAAGTTAGTTGATGTTGGTGGCAGTGGTGGGGATTGTCTCAAAATGATCTTGCAGAAATACCCAAATATTAAAGAAGGGTTAAACTTTGATCTTCCTGAAGTTGTGGCTAAAGCACCACAAATTCCAGGTGTAACTCATGTGGGTGGTGACATGTTCAAATACATTCCCCAAGCTGATGCTATCTTTATGAAGTGGGTGCTAGTAACATGGACAGACAAAGAAATCAAGCACATAATGCAAAATTGTTACAAGGCACTCCCAGCAGGTGGAAAACTAATTGCTTGTGAGCCAGTGTTACCAGAGAATTCAGATGATAGTCACAGAACAAGGGCATTGCTTGAAGGTGACATATTTGTGATGACAATTTACAGAGCCAAAGGAAAACATAGGACTGAAGAACAGTTTAAGCAACTTGGAATTTCTGCAGGTTTCAATCTTTTCAAATCCTTTCATGTGGACCATTTCTATACTGTTCTTGAGTTTCAGAAATGA 1065 0.431 MEEETTESRKQARLAILELANMISVPMSLNAVVRLNVADAIWEGGSNAPLTAAQILARVIPDGSGDAENLQRVLRMLASYGVFEEDIGGGERKYSLTDVGKTLVTDEQGLSYGAYVLQHHQDALMRAWPLVHEAVLDPSKEPFERANGEGAYDYYLKKPEMNELMLKAMSGVSVPFMKALLEGYHGFQNVEKLVDVGGSGGDCLKMILQKYPNIKEGLNFDLPEVVAKAPQIPGVTHVGGDMFKYIPQADAIFMKWVLVTWTDKEIKHIMQNCYKALPAGGKLIACEPVLPENSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLGISAGFNLFKSFHVDHFYTVLEFQK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02707 354 FunFam Caffeic acid 3-O-methyltransferase 109 354 - -
Trre11g02707 354 Gene3D - 1 107 IPR036388 -
Trre11g02707 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Trre11g02707 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Trre11g02707 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Trre11g02707 354 PANTHER O-METHYLTRANSFERASE 19 341 IPR016461 GO:0008168
Trre11g02707 354 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Trre11g02707 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Trre11g02707 354 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02707 Trre-Chr11 35143766 35149558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02707 1 354 Monolignol Biosynthesis Gene Families AT3G53140 73.259 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02707 - - gmx:100784957 611.298