Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02706 ATGGAAATTGGTTCTTCTTCGGTGCCATTGAATGTGAACGAGGTTGATGTCAATGGACAAAAATTGAATCCGAACAACAAATGTGGAGTCCGTGCTGTTAGAAAGAGAATCTATGATCCTGAAAATGGCACAAGTTGTCATCAGTGCCGACAAAAAAGAAAGGTTGTTTGTGCCACGTGTAAGAATCCAAGAGCTGGGAAGCCTTGCCCCCTTAAGTTCTGCGACATGTGCCTCAAGAATAGATATGGAGAAATAGCACAAGAGGTTGATCTCTTGAGTGACTGGATGTGTCCTAAATGCCGTGGCATTTGTAACTGCAGTATCTGCATGAAAGAAAGGGGTCAGAAACCCACTGGTAACCTAGCTCGTAAATCTAAGGCCCGCGGCTTTAAATCCGTGTCTGAAATGCTTAGTAAGAAACCTACTTCCGAAAAGGAACTTGCAGCGAGCCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAGCCTATCAGGGGAACCTACTTACGAAAAGGAACTTGCAGCGAGTCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAGTCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAAGCTGGAAATTAAGGAAGAAATTCCTTTTCCCACTGGCAATGAAATGACAAGAATACTTGACATCGAGTTCACACAAGAAGCTGTTGGAAATGCTTTGCAGTTTCTTGAATTCTGTAGAGTATTTGAAAAGGCTCTTGATATCAAGACAGAAGAAGCGGGAGATATTTTAAGGGCTTTGCGAAGTGGACAAAACACCTTAGTGGTTGAGTTCCAAAGCAAGCTGTTAAATTTGATAATACCTGATTCAGAAATTGAGTCTTCACCCGAAACTGCTAGATGGCTGGAAGTTCTAGAAGAATTAACTATTAAATCTGGTTTTGTACCAAGAGAATTTCCGTTGGATTGGCTTAAAAAAGGCAATAGTGGATATTACGGTTTGGACTTGTCGAAGAAGCTTATCCTTCTTAACTTTATCTGCGATGAAGCTCTGGGCACACCGAAGCTAAGGAAGTATATCGATGAACAAAATGGAATATTTGCTGAAGAAAAGAAAGCGGCAAAAACAAAGGCTGCTGAAGCTAAGGAAAAGGAAAGACATCTTAAACAGAAGTTGAAAGATGAGAAAGCAAAAGCTGTGATATCAAATGATGCTCTACTTGGAAAGATTAAAGATGAAGCAGCTAAAGCTCACGCCGAGTTGATTGAGGCAAAGGGCTCAGTTCCTAAACGGAACCAATGGTGTGAGACAATGAGAATTGAGCGCGAGTACTTGGATAACAATGGCAACGGATTCTGGAAATTAAGAAGTTGCAACAATGAAGATGTTTTCTTGTTACAAGATGTGAAGATCCATGCTGCTGAAGTTGAAGAAAAATGGTTAATTTATGCACCTGAGCAGAAGGAAGAGGTCAACAAGTATATTTCTTCTAGGAGAGATTGA 1497 0.4162 MEIGSSSVPLNVNEVDVNGQKLNPNNKCGVRAVRKRIYDPENGTSCHQCRQKRKVVCATCKNPRAGKPCPLKFCDMCLKNRYGEIAQEVDLLSDWMCPKCRGICNCSICMKERGQKPTGNLARKSKARGFKSVSEMLSKKPTSEKELAASLSGEPTSEKELAASLSGEPTYEKELAASLSGEPTSEKELAASLSGEPTSEKELAAKLEIKEEIPFPTGNEMTRILDIEFTQEAVGNALQFLEFCRVFEKALDIKTEEAGDILRALRSGQNTLVVEFQSKLLNLIIPDSEIESSPETARWLEVLEELTIKSGFVPREFPLDWLKKGNSGYYGLDLSKKLILLNFICDEALGTPKLRKYIDEQNGIFAEEKKAAKTKAAEAKEKERHLKQKLKDEKAKAVISNDALLGKIKDEAAKAHAELIEAKGSVPKRNQWCETMRIEREYLDNNGNGFWKLRSCNNEDVFLLQDVKIHAAEVEEKWLIYAPEQKEEVNKYISSRRD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02706 498 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 38 137 IPR018866 -
Trre11g02706 498 Coils Coil 369 396 - -
Trre11g02706 498 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 326 359 IPR028942 -
Trre11g02706 498 Pfam DDT domain 232 285 IPR018501 -
Trre11g02706 498 PANTHER OS05G0300700 PROTEIN 31 411 IPR040221 GO:0006355
Trre11g02706 498 SMART testlast3 231 290 IPR018501 -
Trre11g02706 498 ProSiteProfiles DDT domain profile. 231 290 IPR018501 -
Trre11g02706 498 MobiDBLite consensus disorder prediction 133 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02706 Trre-Chr11 35112395 35117312 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Trre11g02706 zf-4CXXC_R1 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02706 - - tpra:123894964 659.448