Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02704 ATGGAAATTGGTTCTTCTTCGGTGCCATTGAATGTGAACGAGGTTGATGTCAATGGACAAAAATTGAATCCGAACAACAAATGTGGAGTCCGTGCTGTTAGAAAGAGAATCTATGATCCTGAAAATGGCACAAGTTGTCATCAGTGCCGACAAAAAAGAAAGGTTGTTTGTGCCACGTGTAAGAATCCAAGAGCTGGGAAGCCTTGCCCCCTTAAGTTCTGCGACATGTGCCTCAAGAATAGATATGGAGAAATAGCACAAGAGGTTGATCTCTTGAGTGACTGGATGTGTCCTAAATGCCGTGGCATTTGTAACTGCAGTATCTGCATGAAAGAAAGGGGTCAGAAACCCACTGGTAACCTAGCTCGTAAATCTAAGGCCCGCGGCTTTAAATCCGTGTCTGAAATGCTTAGTAAGAAACCTACTTCCGAAAAGGAACTTGCAGCGAGCCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAGTCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAGTCTATCAGGGGAACCTACTTCCGAAAAGGAACTTGCAGCGAAGCTGGAAATTAAGGAAGAAATTCCTTTTCCCACTGGCAATGAAATGACAAGAATACTTGACATCGAGTTCACACAAGAAGCTGTTGGAAATGCTTTGCAGTTTCTTGAATTCTGTAGAGTATTTGAAAAGGCTCTTGATATCAAGACAGAAGAAGCGGGAGATATTTTAAGGGCTTTGCGAAGTGGACAAAACACCTTAGTGGTTGAGTTCCAAAGCAAGCTGTTAAATTTGATAATACCTGATTCAGAAATTGAGTCTTCACCCGAAACTGCTAGATGGCTGGAAGTTCTAGAAGAATTAACTATTAAATCTGGTTTTGTACCAAGAGAATTTCCGTTGGATTGGCTTAAAAAAGGCAATAGTGGATATTACGGTTTGGACTTGTCGAAGAAGCTTATCCTTCTTAACTTTATCTGCGATGAAGCTCTGGGCACACCGAAGCTAAGGAAGTATATCGATGAACAAAATGGAATATTTGCTGAAGAAAAGAAAGCGGCAAAAACAAAGGCTGCTGAAGCTAAGGAAAAGGAAAGACATCTTAAACAGAAGTTGAAAGATGAGAAAGCAAAAGCTGTGATATCAAATGATGCTCTACTTGGAAAGATTAAAGATGAAGCAGCTAAAGCTCACGCCGAGTTGATTGAGGCAAAGGGCTCAGTTCCTAAACGGAACCAATGGTGTGAGACAATGAGAATTGAGCGCGAGTACTTGGATAACAATGGCAACGGATTCTGGAAATTAAGAAGTTGCAACAATGAAGATGTTTTCTTGTTACAAGATGTGAAGATCCATGCTGCTGAAGTTGAAGAAAAATGGTTAATTTATGCACCTGAGCAGAAGGAAGAGGTCAACAAGTATATTTCTTCTAGGAGAGATTGA 1455 0.4137 MEIGSSSVPLNVNEVDVNGQKLNPNNKCGVRAVRKRIYDPENGTSCHQCRQKRKVVCATCKNPRAGKPCPLKFCDMCLKNRYGEIAQEVDLLSDWMCPKCRGICNCSICMKERGQKPTGNLARKSKARGFKSVSEMLSKKPTSEKELAASLSGEPTSEKELAASLSGEPTSEKELAASLSGEPTSEKELAAKLEIKEEIPFPTGNEMTRILDIEFTQEAVGNALQFLEFCRVFEKALDIKTEEAGDILRALRSGQNTLVVEFQSKLLNLIIPDSEIESSPETARWLEVLEELTIKSGFVPREFPLDWLKKGNSGYYGLDLSKKLILLNFICDEALGTPKLRKYIDEQNGIFAEEKKAAKTKAAEAKEKERHLKQKLKDEKAKAVISNDALLGKIKDEAAKAHAELIEAKGSVPKRNQWCETMRIEREYLDNNGNGFWKLRSCNNEDVFLLQDVKIHAAEVEEKWLIYAPEQKEEVNKYISSRRD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02704 484 ProSiteProfiles DDT domain profile. 217 276 IPR018501 -
Trre11g02704 484 Pfam DDT domain 218 271 IPR018501 -
Trre11g02704 484 PANTHER OS05G0300700 PROTEIN 31 397 IPR040221 GO:0006355
Trre11g02704 484 Coils Coil 355 382 - -
Trre11g02704 484 MobiDBLite consensus disorder prediction 133 185 - -
Trre11g02704 484 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 38 137 IPR018866 -
Trre11g02704 484 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 312 345 IPR028942 -
Trre11g02704 484 SMART testlast3 217 276 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02704 Trre-Chr11 35112395 35117312 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Trre11g02704 zf-4CXXC_R1 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02704 - - tpra:123894964 662.529