Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02703 ATGGAACTCGATTCATCTTCTTCACTACAGCTCAATCAAAGCAATGTTGTTGATGCCAGTGGAAATCAAGTTAGTCGTAACAACTCACGTGGAATTCGTGTTATTGGAAACAGAATCTATGATTCTGAAAATGGTAAATCTTGTCACCAGTGCCGGCAAAAAACCAGAGATTTTTCTGCTGCTTGTAAGAATCCAAGAAATGGGAAGCCTTGTCTCATTAGGTTCTGCCACAAATGCCTCTTGAATAGATACGGCGAAAAGGCTGAAGAGGTAGATCTATTGAGTGATTGGAATTGTCCAAAGTGCAAAGGCATCTGCAACTGTAGTTTATGCATGAAAAAAAGAGGTCAACAACCTACTGGTATACTAGTTCATACAGCCAAGGCCTCTGGTTTTAACTCCGTGTCAGAAATGCTTAGCAAGAAGACTTCTGAAGGTTTGGAATTGAACAATTCTGCTATCTTGCCTATTAAGGAAGCTACTTTGGAAAAGGAGCTTGTGGTGGGTCTATCAGAGGAAACTGGGGAGGAAAACTCATTAAGTGGGAAAAAAGGTTTAAAGGTTGAAAATAAGAAAACCAAGAAAATGAAGCGGGAAGAGTTAAAGGAAATTTCTAATGGCAACAATGTGGATGAAGCTTGCGAAAAAAAGAAATTAAAAAAGCCTAAACTTTGTAATGGTGTTTCAGACTGTGAAGTGAAAAGAAATGCAAATGCTGAAATGGAACCAAAAGTAGAGGAGAATCATGGTATGATTCGTAGTCAAATGGATGGTCCTGTTGTGATGAGTGGTGGTGACAATGCTAGTGCCATGTCTCAAACAAATGCTATAGTTTTGAATGCGCAAAAAATTAAGGAAGAGATTCCTTTGCCCCTTGGCACGGAGATGACAAAAATATTAGACATTGAGTTTGCACCAGAAGATGTTGGGAATGTGTTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGGCTCTTGATGTCAAGAAAGGAGAAGCTGGAGCTATTTTAAGAGCATTGATACGTAAGCAAAATTTGCGACGTGGACAAAATAATTTAGTGGTTGAGTTCCAAATCAAGCTGTTGACTTTGATAGTATCCGAGTCAGAAACTGAGTCTTCATCCTTAACTGCTAGCAATGGAAAAGATTCATGGTTGAAAGTTTTGGAGGATTTAATTACTGAATCTGATCTTGGACTAAAAGAATTTCCGTTGGATTGGCTTAATAAAGGCATTAGCGGATATAATGATTTGGACATAACTAAAAAGCTTATCCTTCTAAATTTCATCTGTGATGAAGCTCTAGGCACAACGAAGCTAAGGAGTTATATTGATGATCAAAATGCAAAACTTGCTGAAGAAAAGAAAGCAGCAAAATCTAAGGTTGCTGAAGCTAAGGAAAAGGAAAGAATTCTTAAGCAACAGTTGCAGGATGAGATGGCAAAAGCTGTAATATCAAATGGGGCCAGCCTCTCAATTTCAGAATATGATGCTCTTGTTTCAAAAATTAAAAGTGATGCAGCTAAAGCTCATAGTGAGTTGCTTGAGGCAAAGGGCACAATTCCTAAACGGAACCAATGTTGTGATGCAGTGAGAATTGAATCTGAGTACTTGGATAACAATGGTAAGGCATTCTGGAAATTAAGGAGCTGTAATGATGAATACGCTTTGTTGTTACAAGATGTGAAGGTCCATGATGAAGGTGTTGTTGAACTTGAAGTTGATGAAAAATGGTTTGTTTATGGAGCTGAGCAGAAAGACGAGGTTAATAAGTACATTTCCTCTAGGAGAGTTTGGTTTCCAAAGCTTGTTTCAGTATAA 1821 0.3817 MELDSSSSLQLNQSNVVDASGNQVSRNNSRGIRVIGNRIYDSENGKSCHQCRQKTRDFSAACKNPRNGKPCLIRFCHKCLLNRYGEKAEEVDLLSDWNCPKCKGICNCSLCMKKRGQQPTGILVHTAKASGFNSVSEMLSKKTSEGLELNNSAILPIKEATLEKELVVGLSEETGEENSLSGKKGLKVENKKTKKMKREELKEISNGNNVDEACEKKKLKKPKLCNGVSDCEVKRNANAEMEPKVEENHGMIRSQMDGPVVMSGGDNASAMSQTNAIVLNAQKIKEEIPLPLGTEMTKILDIEFAPEDVGNVLQFLEFCRVFGKALDVKKGEAGAILRALIRKQNLRRGQNNLVVEFQIKLLTLIVSESETESSSLTASNGKDSWLKVLEDLITESDLGLKEFPLDWLNKGISGYNDLDITKKLILLNFICDEALGTTKLRSYIDDQNAKLAEEKKAAKSKVAEAKEKERILKQQLQDEMAKAVISNGASLSISEYDALVSKIKSDAAKAHSELLEAKGTIPKRNQCCDAVRIESEYLDNNGKAFWKLRSCNDEYALLLQDVKVHDEGVVELEVDEKWFVYGAEQKDEVNKYISSRRVWFPKLVSV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02703 606 PANTHER OS05G0300700 PROTEIN 28 531 IPR040221 GO:0006355
Trre11g02703 606 Coils Coil 448 482 - -
Trre11g02703 606 SMART testlast3 306 371 IPR018501 -
Trre11g02703 606 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 414 445 IPR028942 -
Trre11g02703 606 ProSiteProfiles DDT domain profile. 306 371 IPR018501 -
Trre11g02703 606 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 40 139 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02703 Trre-Chr11 35105074 35109786 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Trre11g02703 zf-4CXXC_R1 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02703 - - mtr:25495611 917.531