Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02668 ATGGTGGGGTTCCAGAACGAGCATATGCCAGGGAACATTTATAGTAGTAGTCCAGGTCGTGTTGAACGACTTGTGAGAGAAAGTGCTGTAGCAGCAGTAAGGGCTCTTAGTGATGGATATGAAAGGGAAGATGCAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCTAATAGACTGCCAGTGTCTGCTGTTAGGAAAGGTGAGGATACTTGGTCTCTGGAGATCAGTGCTGGTGGCTTGGTGAGCGCGCTTTTAGGTGTGAAGGAGTTTGAAGCGAGGTGGATAGGTTGGGCTGGAGTCAATGTTATGGATGCGGTTGGACAGAAGTCACTCTCCGATGCATTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGAGATTGTTAATCAGTACTATAATGGCTATTGCAATAACATATTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAACGACAACTCGTGGATTCCAGTCTCAATTTGATTCGTATCAGCAGGCAAATCAAATGTTTGCTGATGTTGTAAATAAAGTCTATGAAGAGGGAGATATTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCACAATGCTTGAAGAAATTCAACAGCAAAATGAAAGTTGGCTGGTTTCTCCATACCCCGTTTCCATCTTCTGAAATTCACAGGACACTACCATCTCGTTCAGAGCTCTTGCGTGCAGTTCTTGCTGCAGATTTGGTCGGTTTTCACACCTATGATTATGCACGACACTTTGTTAGTGCTTGTACTCGCATTCTTGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCATGGGAAACTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGACCGCTTTATTCGTGCACTTGACCTTCCTCAAGTCCAAGGTCCCATCAAAGACTTACAAGAAAGATTTAAAGGCAGAAAGGTTATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAGAAATTTTTGGAAGAAAATGAAGATTGGCGAGAAAAAGTTGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCGGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTGACTGCTGTTCCTATACATCACTTGGACCGCACTCTTGATTTTCATGCACTATGTGCTTTGTACGCTGTTACAGATGTAGCAATTGTCACCTCTTTGAGGGATGGAATGAATCTTGTCAGTTACGAGTTTGTGGCCTGCCAAGAAAAAAGGAAGGGGGTTCTCATTCTTAGTGAATTTGCCGGTGCTGCGCAGTCTCTTGGTGCTGGGGCACTTCTGGTCAACCCCTGGAACATCTCAAAAGTTGCTGAAACAATTGCCAAAGCTCTGAACATGCCATCTGCTGAAAGAGAGAAACGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCACAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTCGTTGAGGCTCAGCTAAGGACAAAACAAGTTCCACCACGGCTCCCAACTCCAAAAGCAATTCAACAATATATGAAGGCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAGCCAGTTGAGAGAAAAGGTGATCAATTGAAAGAAATGGAACTCTCGGTGCATCCAGAACTGAAACAACCCTTGATACAACTATGCAGTGACCCAAATACTACAGTTGTCGTGCTTAGTGGAAGTGGTAGAACACTTCTCGATGAAAACTTTAGAGAATATAACACTTGGCTGGCAGCGGAGAATGGGATGTTTTTGAACTCTTCAAATGGAGAATGGATGACAACAATGCCAGAACAACTAAATATGGAATGGGTTGACAGCGTAAAGCATATTTTTGAGTATTTCACTGAAAGAACACCTCGGTCACATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAACATCTCTACTCAGGTCCAATTTCAAGTGCATCAGTTGAAGTAGTTCAAGGGAGCCGATCAGTTGAGGTTCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATAGTTCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGGAAAGGATGAAGACATATACGACTTTTTTGAGCCAGAGCCTTCTTGTTATGGTGCGAGTCTTCAACGAAGCAAGTTAACAGATGCAGCTAAGTTTCATAATGAGAAGGCATCACCAATGAAGATCCCAGCAATTAAAAATGGATTCAAGTCAACAAATCAAAACAAGGGACAACGACCTATCTCAAATTCAGAGAAGAAAACAAATAATTGCAGTCGCGCAGCACGGAAGCCAGCTCCCGAAAAGATCTCTTGGAATGTCCTTGACCTTAAGAAGGAGAATTACTTCTCATGTGCTGTTGGGAGAACTCAAACAAATGCTCGCTTTACGCTTCCATCGTCTGATGAGGTTGCTGAATTTCTGAAGAAACTTGCACATACATCTTCTAGTAATAACTGA 2658 0.4274 MVGFQNEHMPGNIYSSSPGRVERLVRESAVAAVRALSDGYEREDAKPVRQRLLVVANRLPVSAVRKGEDTWSLEISAGGLVSALLGVKEFEARWIGWAGVNVMDAVGQKSLSDALAEKRCIPVFLTEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLTTTRGFQSQFDSYQQANQMFADVVNKVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDHGKLTRVAAFPIGIDSDRFIRALDLPQVQGPIKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRTLDFHALCALYAVTDVAIVTSLRDGMNLVSYEFVACQEKRKGVLILSEFAGAAQSLGAGALLVNPWNISKVAETIAKALNMPSAEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTPKAIQQYMKATNRLLILGFNGTLTEPVERKGDQLKEMELSVHPELKQPLIQLCSDPNTTVVVLSGSGRTLLDENFREYNTWLAAENGMFLNSSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLYSGPISSASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYDFFEPEPSCYGASLQRSKLTDAAKFHNEKASPMKIPAIKNGFKSTNQNKGQRPISNSEKKTNNCSRAARKPAPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDEVAEFLKKLAHTSSSNN 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02668 885 Pfam Glycosyltransferase family 20 51 516 IPR001830 GO:0003824|GO:0005992
Trre11g02668 885 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 298 500 - -
Trre11g02668 885 CDD GT20_TPS 51 516 IPR001830 GO:0003824|GO:0005992
Trre11g02668 885 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 50 519 - -
Trre11g02668 885 CDD HAD_TPP 549 766 - -
Trre11g02668 885 Gene3D - 638 718 - -
Trre11g02668 885 MobiDBLite consensus disorder prediction 799 830 - -
Trre11g02668 885 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 43 297 - -
Trre11g02668 885 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 44 878 IPR001830 GO:0003824|GO:0005992
Trre11g02668 885 Pfam Trehalose-phosphatase 554 771 IPR003337 GO:0003824|GO:0005992
Trre11g02668 885 Gene3D Glycogen Phosphorylase B; 298 500 - -
Trre11g02668 885 MobiDBLite consensus disorder prediction 800 822 - -
Trre11g02668 885 Gene3D - 551 732 IPR023214 -
Trre11g02668 885 SUPERFAMILY HAD-like 548 879 IPR036412 -
Trre11g02668 885 Gene3D Glycogen Phosphorylase B; 43 297 - -
Trre11g02668 885 NCBIfam trehalose-phosphatase 547 787 IPR003337 GO:0003824|GO:0005992
Trre11g02668 885 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 638 718 - -
Trre11g02668 885 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 51 516 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02668 Trre-Chr11 33543353 33551358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02668 41 883 Trehalose Biosynthesis Gene Families AT1G78580 77.558 0.0 1386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02668 K16055 - gmx:100789554 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02668 11 33543353 33551358 Trre11g02668 11 33543353 33551358 ECH