Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02641 ATGTGTAAGAATCCTTCCATTTGTGTCCATTTGTATCCAAACTTAAGAACCTTTCTGATACATCATCTTCTCTCATGTCACAGGAACTTATTTTCTCCCTCATGGGCACGCAATGACATAGGAACAGTTCCGTGCTTGAGGTTTGAATGTCCCAAACCCTCATACTCCCTTTATATTAATTGTGGTGGACAGCAAACCACGGTCAACAAAACAAGTTATCATGGTGATCTAGATTTACCTGGACCGGCTAGATTCCATCACAGTCCAAAAGGAAATTGGGCATTTAGCACCACTGGTATATTCATGGAAAGTAATCAATTTCTAGTAAATTATCGGCCGCAAATTGTCACAAAACTTACTATGGTGGATACTGATTTGTACACGAACGCACGTGTTTCTCCTATTTCTTTGACTTATTACGGGTTTTGCCTGGCAAATGGAAGCTACACATTGAATCTACATTTTGCGGAAATAATGTTCACTGACGATCAAACTTATCGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAATGCTAATGAAAAAGGACTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGAAAGTCATAAAGAAGTTCAAAGGTGTTGTTGTTACTAGTAATACTATGGAGATCCGCTTATATTGGGCTGGAAGAGGGACACAGGCTCTCCCAAATAAATCAGTATATGGTCCTCTTATATCGGCTATATCAGTGGAATCTGATTCTCCACCGGGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCGGCAGTAATTATTATCATTCTATTATTTGGTATACTTTGGTGGAAGGAATGTTTTGGAAAGAAAAACTCATTAGCAAGAGAGCTGGAGAGTTTGGACCTACAAACAGGTTTATATACCTTAAGACAAATCAAAGCAGCAACAAACAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTATCCAACGGGACATTGATTGCAGTTAAGCAACTTTCTTCTAAATCAAGGCAAGGGAACCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTACAACACCCATATCTTGTTAAACTATATGGCTGTTGTGTGGAGGGAGATCAATTGCTGTTGATATATGAATACTTGGAAAACAATAGCCTTGCCCGTGCTTTATTTGGTCCAGAGGAAGAACAGATCAAATTAGATTGGTTACTAAGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGACATTCCTTCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACTAATGTGTTGCTCGATAAAGATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGCACTAAAATTGCGGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAGGAGCAACACCCTTTATCGGACAAAGGAAGAAGCATTCTATCTTCTTGACTGGGCACATTCGTTGAAAGAAAGTGGTGACCTAATGGAACTCGTTGATAGAAGATTAGGTTCAGATTTCAATAAACAAGAAGCTCTGGTGATGATCAATGTGGCTCTTCTGTGCACCAACGTCACTTCAAACCTTCGGCCCTCTATGTCGTCAGTGGTAAGTATGCTTGAAGGAAAGACTGTGGTTCCAGAATTTGTGCCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTGATGAGGCAGTATTACTATCAGATTGACGAAAATGATATAAGTAAGCCACAAACACAAAGTCAGAGTTTATTAAGTGATGGGCCATGGACTGCTACATCTTCATCAGGTGTAGACCTTTATCCTATCCACAGTGATTCTTCCTATTGGGAGGAAAGAAGTTAA 1986 0.3968 MCKNPSICVHLYPNLRTFLIHHLLSCHRNLFSPSWARNDIGTVPCLRFECPKPSYSLYINCGGQQTTVNKTSYHGDLDLPGPARFHHSPKGNWAFSTTGIFMESNQFLVNYRPQIVTKLTMVDTDLYTNARVSPISLTYYGFCLANGSYTLNLHFAEIMFTDDQTYRSLGRRVFDIYLQGMLMKKDFNIAEEAGGVGKKVIKKFKGVVVTSNTMEIRLYWAGRGTQALPNKSVYGPLISAISVESDSPPGSISAGAVVGIVVAAVIIIILLFGILWWKECFGKKNSLARELESLDLQTGLYTLRQIKAATNNFDISNKIGEGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEEQIKLDWLLRQKICVGIARGLTFLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLAKLDEEDNTHISTKIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTLYRTKEEAFYLLDWAHSLKESGDLMELVDRRLGSDFNKQEALVMINVALLCTNVTSNLRPSMSSVVSMLEGKTVVPEFVPDSSEVMDEKKMEVMRQYYYQIDENDISKPQTQSQSLLSDGPWTATSSSGVDLYPIHSDSSYWEERS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02641 661 FunFam Putative LRR receptor-like serine/threonine-protein kinase 389 596 - -
Trre11g02641 661 MobiDBLite consensus disorder prediction 624 649 - -
Trre11g02641 661 Pfam Protein tyrosine and serine/threonine kinase 315 584 IPR001245 GO:0004672|GO:0006468
Trre11g02641 661 Gene3D Transferase(Phosphotransferase) domain 1 389 595 - -
Trre11g02641 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Trre11g02641 661 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 282 388 - -
Trre11g02641 661 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 29 612 - -
Trre11g02641 661 Gene3D Phosphorylase Kinase; domain 1 279 388 - -
Trre11g02641 661 CDD STKc_IRAK 319 586 - -
Trre11g02641 661 Gene3D - 54 246 - -
Trre11g02641 661 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 54 246 - -
Trre11g02641 661 Pfam Malectin domain 56 241 IPR021720 -
Trre11g02641 661 SMART serkin_6 313 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02641 661 MobiDBLite consensus disorder prediction 624 661 - -
Trre11g02641 661 ProSiteProfiles Protein kinase domain profile. 313 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02641 661 SUPERFAMILY Protein kinase-like (PK-like) 296 601 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02641 Trre-Chr11 33123456 33128099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02641 24 643 Receptor kinase-like Gene Family AT1G53430 56.489 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02641 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02641 - - cam:101501658 860.907