Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02637 ATGAATTTCTCTCTAATACTACATATTTTGCTTCTTGCTTTTTCTTTGATTTCTTCATTTACTAGTGGAGCTACTCTGTCACAAGAAGAAGTACAAGTTATGAAAGACATAGGAAGGACACTTGGGAAGAAGGATTGGGATTTCAGCGTGGATCCATGCAGTGGACAAAATAACTGGAACACATCTTCTGTGCAAGTGAAAGGATTTGAAAATGTTGTCACTTGCAATTGCTCTTTTGCAAATGCCACTGTCTGCCATATTGTTAGCATTGTTCTGAAGTCACAAAATCTTTCTGGCACACTTCCAACAGAACTTGTGAAATTGCCTTACCTCCAAGAAATTAATCTCAAAAACAACTACCTTAATGGTACAATTCCACCACAATGGGGTTCCATGACCAATCTTATCGACATTGAACTATTAGGAAATCGATTAACAGGTCCAATCCCAAAAGAGCTTGGAAATATCACCACCCTGAAAATATTGAACCTGAAGTTCAATCAATTATCTGGAGAGCTTCCTCCAGAGCTTGGGAATCTTCACCAGCTTGAAAGACTGCTTCTTTCCTCGAACAATTTTACTGGAAATATACCTGCAACATATGCTAAGCTCACTAAACTGAAGCACATTCGACTTTGCGATAATCAATTCTCTGGACCTATACCTGATTTCATTCAGAGCTGGACAAGTCTTGAGAGGATGGTGATGCAAGGGAGTGGTTTGAGTGGCCCAATTCCTTCTGGAATTTCATATCTAAAAAACCTCACTGATTTGAGAGTAACTGACTTGAAAGGACCGGATTCTTCTTTTCCGCAACTTATTAACTTGACAATTCTACAAACATTAGTACTGAGGAGTTGCAATCTTATAGGAACAGTTCCTGAATATCTTGGAAATATTACCACATTAAGATCATTAGACCTCAGTTTTAACAAATTAAGTGGACAGATACCGAACACTTTGGGCGTCCTCGAGAACATAAATCTACTATACTTAACTGGAAACCTGTTTACTGGACCACTGCCAAAATGGATAGCTAGACCAGACTACACAGATCTATCATATAACAACTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAGGGAACAGTGAACTTATTTTCATCATCTTCAAAGGGAAGTAACTTGGGAATGGTTTCATGTTTGGGGAACAATGTCTGTCCTAAAAAATCATACTCTCTCCATATCAATTGTGGTGGAAAGCTCATAACATCTAATAAAAGCCTGACATATGTAAATGATTCAAATGAAATTGGACCGGCAAGCTTTCACCGGAGTGGTTCGAATTGGGCTCTTAGCAACACTGGTCACTTTTTTGATAGTAGCCTTGTAGACTACTATACCTGGTCTAATCAAACTAATCTTGCCATGGAAAATTCCGAACTGTATATGGATGCACGTGTTTCTCCTCTTTCTTTAACATATTACGGATTTTGCCTGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCGGAGATAATGTTTACAGATGATCAAACATATAACAGCCTTGGAAGGCGTATATTTGACATCTACATTCAGGGAAGGTTGGTACTGAAGGATTTCAATATCGCAAAAGAAGCCGGTGGAGTGGGTAAGGCAATCATAAAGAAGTTCACTGCTATTGTGACTAGTAATACGTTGGAGATTCGCCTTCATTGGGCTGGGAAAGGCACAACTGGTCTCCCATTTGATTCAGTATACGGTCCTCTTATATCGGCTATATCGGTTGATCCTGACTTTACACCCCCGGTGGAAAAACGAAGTAGCATACCTGTGCGTAATATTGTGGCAATAGTAGTTTCTGCAGCCCTAGTTATCTTATTTGTATTTGGCATAGCTTTCTGGAGAATATGTCGACGACATATAGGTCCATTGGAAAGAGAGATGAAGAGTTTAGACCTTCAAACGGGTTTATTTACATTGAGACAAATCAAAGAAGCAACAAACAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCTGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGCGAGTTTTTAAATGAGATTGGCATGATTTCTGCTTTGCAGCATCCTTATCTTGTTAAACTCTATGGTTGTTGTGTCGAGGGAGATCAGTTGTTGTTGATATATGAATACCTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTCCAGAGGAACACCAATTAAAATTAGATTGGTCAACAAGGAATAAGATATGTGTTGGTATTGCTAGAGGTTTGGCTTACCTTCATGAAGAGTCAAGACTGAAGGTTGTTCATAGGGACATAAAATCCACTAATGTGCTACTTGATACGGATCTCGGCCCAAAGATATCTGATTTTGGGTTGGCCAAACTTGATGAGGAGGACAATACTCACATTAGCACTAGAATAGCCGGTACCTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAGGAGCAACACCTTTTATCGGACAAAGGAAGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGTGACCTAATGGAGCTAGTTGATAGCAGATTAGGTTCAGATTTCAAGAAAAAGGAAGTTATGGTGATGATCGATGTGGCTCTCCTATGCACCAATGTCACTTCGAACCTTAGGCCGTCTATGTCGTCAGTAGTAAGTATGCTTGAAGGAAGCACTGCAGTCCCCGAATCTGTGCCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTAATGAGGCAGCATTACTATCAGACGGATAAAACAAGCAAGTCACAATCACAGAGTCAGCGTTTATTGAATGATGGACCGTGGACTGCTACAACTTCATCGGTTGACCTTTATTCTGTCCACCTTGATTCTTCCTATTTGGAGGATAGAAATTAA 3024 0.3942 MNFSLILHILLLAFSLISSFTSGATLSQEEVQVMKDIGRTLGKKDWDFSVDPCSGQNNWNTSSVQVKGFENVVTCNCSFANATVCHIVSIVLKSQNLSGTLPTELVKLPYLQEINLKNNYLNGTIPPQWGSMTNLIDIELLGNRLTGPIPKELGNITTLKILNLKFNQLSGELPPELGNLHQLERLLLSSNNFTGNIPATYAKLTKLKHIRLCDNQFSGPIPDFIQSWTSLERMVMQGSGLSGPIPSGISYLKNLTDLRVTDLKGPDSSFPQLINLTILQTLVLRSCNLIGTVPEYLGNITTLRSLDLSFNKLSGQIPNTLGVLENINLLYLTGNLFTGPLPKWIARPDYTDLSYNNLSIENPEQLTCQQGTVNLFSSSSKGSNLGMVSCLGNNVCPKKSYSLHINCGGKLITSNKSLTYVNDSNEIGPASFHRSGSNWALSNTGHFFDSSLVDYYTWSNQTNLAMENSELYMDARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYNSLGRRIFDIYIQGRLVLKDFNIAKEAGGVGKAIIKKFTAIVTSNTLEIRLHWAGKGTTGLPFDSVYGPLISAISVDPDFTPPVEKRSSIPVRNIVAIVVSAALVILFVFGIAFWRICRRHIGPLEREMKSLDLQTGLFTLRQIKEATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQLKLDWSTRNKICVGIARGLAYLHEESRLKVVHRDIKSTNVLLDTDLGPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTFYRTKEEAFYLLDWAHMLKERGDLMELVDSRLGSDFKKKEVMVMIDVALLCTNVTSNLRPSMSSVVSMLEGSTAVPESVPDSSEVMDEKKMEVMRQHYYQTDKTSKSQSQSQRLLNDGPWTATTSSVDLYSVHLDSSYLEDRN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02637 1007 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02637 1007 Pfam Leucine Rich Repeat 303 324 IPR001611 GO:0005515
Trre11g02637 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 973 - -
Trre11g02637 1007 Gene3D Transferase(Phosphotransferase) domain 1 738 957 - -
Trre11g02637 1007 SUPERFAMILY Protein kinase-like (PK-like) 645 948 IPR011009 -
Trre11g02637 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 737 - -
Trre11g02637 1007 Gene3D - 398 589 - -
Trre11g02637 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Trre11g02637 1007 ProSiteProfiles Protein kinase domain profile. 662 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02637 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Trre11g02637 1007 Pfam Malectin domain 402 585 IPR021720 -
Trre11g02637 1007 CDD STKc_IRAK 668 935 - -
Trre11g02637 1007 SUPERFAMILY L domain-like 82 358 - -
Trre11g02637 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 363 - -
Trre11g02637 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 30 191 - -
Trre11g02637 1007 Pfam Protein kinase domain 664 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02637 1007 Gene3D Phosphorylase Kinase; domain 1 630 737 - -
Trre11g02637 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 400 590 - -
Trre11g02637 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 264 - -
Trre11g02637 1007 Gene3D Ribonuclease Inhibitor 43 199 IPR032675 -
Trre11g02637 1007 Gene3D Ribonuclease Inhibitor 200 261 IPR032675 -
Trre11g02637 1007 Gene3D Ribonuclease Inhibitor 262 379 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02637 Trre-Chr11 33050949 33058143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02637 17 977 Receptor kinase-like Gene Family AT1G53420 54.620 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02637 Pkinase 6.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02637 - - gmx:100786496 1471.06