Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02636 ATGAACATTTTTTTTAATAGTGTTCTGAAGTCACAAAATCTTTCTGGCACACTTCCAAGTGAACTTGAGAGACTGCCTTACCTCCAAGAAATTGATCTCACACTCAACTACCTTAATGGTACAATCCCTCCACAATGGGCATCCATGACCAATCTTGTCATCATCTCACTCTATGGAAATCGGTTAACCGGTCCAATCCCAAAAGAACTTGGAAATATGACCACCCTCAAAACCTTGGTTCTAGAGTTCAATCAATTATCTGGAGAGCTTCCTCCAGAGCTTGGAAATCTTAACCAGCTTGAAATTATGCTTCTTACCTCCAACAATTTCACTGGAAATTTACCTGCAACATTTTCTAAGCTCACTAAATTGAAGCATGTTCGACTCGGCGGCAATCAATTCTCTGGAACATTACCTGATTTCATTCAGAGTTGGACAGGTCTTCAAAGGCTGGTAATGCAAGGGAGTGGTTTGAGTGGCCCAGTTCCTTCTGGAATTTCATATCTGAAAAACCTCACTGACTTGAAAATAAGTGACTTGAAAGGACCGGATTCTCCTTTTCCGCAACTTATTAACTTGACAATTCTACAAACATTAGTACTGAGGAGTTGCAATCTTATAGGAACAGTTCCTGAATATCTTGGAAATATTACCACATTAAGAAACTTAGATCTCAGTTTTAACAAATTAAGTGGACAAATTCCGAACACATTGGGCGTCCTCGAGAACATAAATATTCTATTCTTAACTGGAAACCTTTTTACTGGACCACTGCCAAATTGGATAGCTAGACCAGACTACACAGATCTATCATATAACAACTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAAGGAACAGTGAATTTGTTTGCATCATCTTCAAAGAGAAGTAACTTGGGAATGGTTTCATGTTTGGGGAACAATGGCTGTCCTAAAAAGTCATACTCTCTCCATATCAATTGTGGTGGGAAGCCGATAACTTCTAATAAAAGCTTGACATATGACGATGATTCAAATGAAATTGGACCAGCAAGCTTTCACCTGAGTGGTTCGAATTGGGCTCTTAGCAACACTGGTCACTTCTTTGATAGTGGCCTTAAGGACTACTATACCTGGTCTACTAAAACTAATCTTGCCATGGAAAATGCTGAACTGTATACGGATGCACGTGTTTCTCCTCAATCTCTAACATATTATGGATTTTGCCTGGGAAATGGAAACTATACAGTAAATCTCCATTTTGCGGAGATAATGTTTACGGATGATCAAACATATAGCAGCCTTGGAAGGCGTATATTTGACATCTATATTCAGGGAAGGTTGGTATTGAAGGATTTCAATATTGCAAAAGAAGCAGGGGGAGTTCGTAAGGCAATCATAAAGAAGTTCACTGCTATTGTGACTAATAATAACTTGGAGATTCGCCTTCATTGGGCTGGGAAAGGGACAACTGCTATTCCATTCGGATCAGTATATGGTCCTCTTATATCAGCTATAACCGTTGATCCTAACTTTACACCCCCAGTGGAAAAAGGAAGTAGTATACCTGCTCGGAATATTGTGGCAATAGTAATTTCTGCAGCACTAGTTATCTTATTTGTATTTGGCTTAGCTTGGTGGAGAATATGTCGACGACAGATAGGTCCATTAGAAAGGGAGATGAAGAGTTTAGACCTTCAAACGGGTTTATTTACATTGAGACAAATCAAAGAAGCAACAAACAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCGGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCCGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGCGAGTTTTTAAATGAGATTGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCTATGGTTGTTGTGTCGAGGGAGATCAGTTGTTACTGATATATGAATACTTGGAAAACAATAGTCTAGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAGATTAGATTGGTCAACAAGGAAGAAGATCTGTGTTGGTATTGCTAGAGCCAAGCTTGATGAAGAGGACAATACTCACATTAGCACTAGAATTGCTGGTACCTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATCGTTAGTGGAAAGAGCAACACCCTTTATCGAACAAAGGAAGAAGCATTTTATCTTCTTGATTGGGCACATTCGTTGAGAGAAAAGGGTGACCTAATGGAACTCGTTGATAGAAGATTAGGTTCAGATTTGAATAAAAAAGAAGCTCTGGTGATGATCAATGTGGCTCTTCTGTGCACCAATGTCACTTCAAACCTTCGGCCCTCTATGTCGTCAGTGGTAAGTATGCTTGAAGGAACGACTATGGTTCCAGAATTTGTAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTGATGAGGCAGTATTACTATCAGATAGAAGACAATGAGATAAGTAAGCCAGAGACGCAACGTCAGAGTTTATTAAGTGATGGGCCATGGACTACTACATCTTCATCAGGTGTAGACCTTTATCCTATCCACAATGATTCTTCCTTATGGGAGGGAAGAAGTTAA 2667 0.3922 MNIFFNSVLKSQNLSGTLPSELERLPYLQEIDLTLNYLNGTIPPQWASMTNLVIISLYGNRLTGPIPKELGNMTTLKTLVLEFNQLSGELPPELGNLNQLEIMLLTSNNFTGNLPATFSKLTKLKHVRLGGNQFSGTLPDFIQSWTGLQRLVMQGSGLSGPVPSGISYLKNLTDLKISDLKGPDSPFPQLINLTILQTLVLRSCNLIGTVPEYLGNITTLRNLDLSFNKLSGQIPNTLGVLENINILFLTGNLFTGPLPNWIARPDYTDLSYNNLSIENPEQLTCQQGTVNLFASSSKRSNLGMVSCLGNNGCPKKSYSLHINCGGKPITSNKSLTYDDDSNEIGPASFHLSGSNWALSNTGHFFDSGLKDYYTWSTKTNLAMENAELYTDARVSPQSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRIFDIYIQGRLVLKDFNIAKEAGGVRKAIIKKFTAIVTNNNLEIRLHWAGKGTTAIPFGSVYGPLISAITVDPNFTPPVEKGSSIPARNIVAIVISAALVILFVFGLAWWRICRRQIGPLEREMKSLDLQTGLFTLRQIKEATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIRLDWSTRKKICVGIARAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLYRTKEEAFYLLDWAHSLREKGDLMELVDRRLGSDLNKKEALVMINVALLCTNVTSNLRPSMSSVVSMLEGTTMVPEFVDSSEVMDEKKMEVMRQYYYQIEDNEISKPETQRQSLLSDGPWTTTSSSGVDLYPIHNDSSLWEGRS 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02636 888 Gene3D Ribonuclease Inhibitor 107 180 IPR032675 -
Trre11g02636 888 FunFam Leucine-rich repeat receptor protein kinase EMS1 18 115 - -
Trre11g02636 888 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 116 181 - -
Trre11g02636 888 SUPERFAMILY Protein kinase-like (PK-like) 562 825 IPR011009 -
Trre11g02636 888 Gene3D Transferase(Phosphotransferase) domain 1 684 830 - -
Trre11g02636 888 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 283 - -
Trre11g02636 888 Pfam Malectin domain 319 502 IPR021720 -
Trre11g02636 888 Pfam Protein tyrosine and serine/threonine kinase 581 688 IPR001245 GO:0004672|GO:0006468
Trre11g02636 888 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 317 507 - -
Trre11g02636 888 ProSiteProfiles Protein kinase domain profile. 579 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02636 888 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 548 654 - -
Trre11g02636 888 SUPERFAMILY L domain-like 10 275 - -
Trre11g02636 888 Gene3D - 315 506 - -
Trre11g02636 888 Gene3D Ribonuclease Inhibitor 181 313 IPR032675 -
Trre11g02636 888 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 689 - -
Trre11g02636 888 Gene3D Ribonuclease Inhibitor 5 106 IPR032675 -
Trre11g02636 888 Gene3D Phosphorylase Kinase; domain 1 547 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02636 Trre-Chr11 33020233 33026781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02636 9 861 Receptor kinase-like Gene Family AT1G53420 53.726 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02636 Malectin 1.6e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02636 - - psat:127081874 1321.22