Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g02636 | ATGAACATTTTTTTTAATAGTGTTCTGAAGTCACAAAATCTTTCTGGCACACTTCCAAGTGAACTTGAGAGACTGCCTTACCTCCAAGAAATTGATCTCACACTCAACTACCTTAATGGTACAATCCCTCCACAATGGGCATCCATGACCAATCTTGTCATCATCTCACTCTATGGAAATCGGTTAACCGGTCCAATCCCAAAAGAACTTGGAAATATGACCACCCTCAAAACCTTGGTTCTAGAGTTCAATCAATTATCTGGAGAGCTTCCTCCAGAGCTTGGAAATCTTAACCAGCTTGAAATTATGCTTCTTACCTCCAACAATTTCACTGGAAATTTACCTGCAACATTTTCTAAGCTCACTAAATTGAAGCATGTTCGACTCGGCGGCAATCAATTCTCTGGAACATTACCTGATTTCATTCAGAGTTGGACAGGTCTTCAAAGGCTGGTAATGCAAGGGAGTGGTTTGAGTGGCCCAGTTCCTTCTGGAATTTCATATCTGAAAAACCTCACTGACTTGAAAATAAGTGACTTGAAAGGACCGGATTCTCCTTTTCCGCAACTTATTAACTTGACAATTCTACAAACATTAGTACTGAGGAGTTGCAATCTTATAGGAACAGTTCCTGAATATCTTGGAAATATTACCACATTAAGAAACTTAGATCTCAGTTTTAACAAATTAAGTGGACAAATTCCGAACACATTGGGCGTCCTCGAGAACATAAATATTCTATTCTTAACTGGAAACCTTTTTACTGGACCACTGCCAAATTGGATAGCTAGACCAGACTACACAGATCTATCATATAACAACTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAAGGAACAGTGAATTTGTTTGCATCATCTTCAAAGAGAAGTAACTTGGGAATGGTTTCATGTTTGGGGAACAATGGCTGTCCTAAAAAGTCATACTCTCTCCATATCAATTGTGGTGGGAAGCCGATAACTTCTAATAAAAGCTTGACATATGACGATGATTCAAATGAAATTGGACCAGCAAGCTTTCACCTGAGTGGTTCGAATTGGGCTCTTAGCAACACTGGTCACTTCTTTGATAGTGGCCTTAAGGACTACTATACCTGGTCTACTAAAACTAATCTTGCCATGGAAAATGCTGAACTGTATACGGATGCACGTGTTTCTCCTCAATCTCTAACATATTATGGATTTTGCCTGGGAAATGGAAACTATACAGTAAATCTCCATTTTGCGGAGATAATGTTTACGGATGATCAAACATATAGCAGCCTTGGAAGGCGTATATTTGACATCTATATTCAGGGAAGGTTGGTATTGAAGGATTTCAATATTGCAAAAGAAGCAGGGGGAGTTCGTAAGGCAATCATAAAGAAGTTCACTGCTATTGTGACTAATAATAACTTGGAGATTCGCCTTCATTGGGCTGGGAAAGGGACAACTGCTATTCCATTCGGATCAGTATATGGTCCTCTTATATCAGCTATAACCGTTGATCCTAACTTTACACCCCCAGTGGAAAAAGGAAGTAGTATACCTGCTCGGAATATTGTGGCAATAGTAATTTCTGCAGCACTAGTTATCTTATTTGTATTTGGCTTAGCTTGGTGGAGAATATGTCGACGACAGATAGGTCCATTAGAAAGGGAGATGAAGAGTTTAGACCTTCAAACGGGTTTATTTACATTGAGACAAATCAAAGAAGCAACAAACAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCGGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCCGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGCGAGTTTTTAAATGAGATTGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCTATGGTTGTTGTGTCGAGGGAGATCAGTTGTTACTGATATATGAATACTTGGAAAACAATAGTCTAGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAGATTAGATTGGTCAACAAGGAAGAAGATCTGTGTTGGTATTGCTAGAGCCAAGCTTGATGAAGAGGACAATACTCACATTAGCACTAGAATTGCTGGTACCTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATCGTTAGTGGAAAGAGCAACACCCTTTATCGAACAAAGGAAGAAGCATTTTATCTTCTTGATTGGGCACATTCGTTGAGAGAAAAGGGTGACCTAATGGAACTCGTTGATAGAAGATTAGGTTCAGATTTGAATAAAAAAGAAGCTCTGGTGATGATCAATGTGGCTCTTCTGTGCACCAATGTCACTTCAAACCTTCGGCCCTCTATGTCGTCAGTGGTAAGTATGCTTGAAGGAACGACTATGGTTCCAGAATTTGTAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTGATGAGGCAGTATTACTATCAGATAGAAGACAATGAGATAAGTAAGCCAGAGACGCAACGTCAGAGTTTATTAAGTGATGGGCCATGGACTACTACATCTTCATCAGGTGTAGACCTTTATCCTATCCACAATGATTCTTCCTTATGGGAGGGAAGAAGTTAA | 2667 | 0.3922 | MNIFFNSVLKSQNLSGTLPSELERLPYLQEIDLTLNYLNGTIPPQWASMTNLVIISLYGNRLTGPIPKELGNMTTLKTLVLEFNQLSGELPPELGNLNQLEIMLLTSNNFTGNLPATFSKLTKLKHVRLGGNQFSGTLPDFIQSWTGLQRLVMQGSGLSGPVPSGISYLKNLTDLKISDLKGPDSPFPQLINLTILQTLVLRSCNLIGTVPEYLGNITTLRNLDLSFNKLSGQIPNTLGVLENINILFLTGNLFTGPLPNWIARPDYTDLSYNNLSIENPEQLTCQQGTVNLFASSSKRSNLGMVSCLGNNGCPKKSYSLHINCGGKPITSNKSLTYDDDSNEIGPASFHLSGSNWALSNTGHFFDSGLKDYYTWSTKTNLAMENAELYTDARVSPQSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRIFDIYIQGRLVLKDFNIAKEAGGVRKAIIKKFTAIVTNNNLEIRLHWAGKGTTAIPFGSVYGPLISAITVDPNFTPPVEKGSSIPARNIVAIVISAALVILFVFGLAWWRICRRQIGPLEREMKSLDLQTGLFTLRQIKEATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIRLDWSTRKKICVGIARAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLYRTKEEAFYLLDWAHSLREKGDLMELVDRRLGSDLNKKEALVMINVALLCTNVTSNLRPSMSSVVSMLEGTTMVPEFVDSSEVMDEKKMEVMRQYYYQIEDNEISKPETQRQSLLSDGPWTTTSSSGVDLYPIHNDSSLWEGRS | 888 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g02636 | 888 | Gene3D | Ribonuclease Inhibitor | 107 | 180 | IPR032675 | - | |
Trre11g02636 | 888 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 18 | 115 | - | - | |
Trre11g02636 | 888 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase isoform A | 116 | 181 | - | - | |
Trre11g02636 | 888 | SUPERFAMILY | Protein kinase-like (PK-like) | 562 | 825 | IPR011009 | - | |
Trre11g02636 | 888 | Gene3D | Transferase(Phosphotransferase) domain 1 | 684 | 830 | - | - | |
Trre11g02636 | 888 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 187 | 283 | - | - | |
Trre11g02636 | 888 | Pfam | Malectin domain | 319 | 502 | IPR021720 | - | |
Trre11g02636 | 888 | Pfam | Protein tyrosine and serine/threonine kinase | 581 | 688 | IPR001245 | GO:0004672|GO:0006468 | |
Trre11g02636 | 888 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 317 | 507 | - | - | |
Trre11g02636 | 888 | ProSiteProfiles | Protein kinase domain profile. | 579 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g02636 | 888 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 548 | 654 | - | - | |
Trre11g02636 | 888 | SUPERFAMILY | L domain-like | 10 | 275 | - | - | |
Trre11g02636 | 888 | Gene3D | - | 315 | 506 | - | - | |
Trre11g02636 | 888 | Gene3D | Ribonuclease Inhibitor | 181 | 313 | IPR032675 | - | |
Trre11g02636 | 888 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 9 | 689 | - | - | |
Trre11g02636 | 888 | Gene3D | Ribonuclease Inhibitor | 5 | 106 | IPR032675 | - | |
Trre11g02636 | 888 | Gene3D | Phosphorylase Kinase; domain 1 | 547 | 654 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g02636 | Trre-Chr11 | 33020233 | 33026781 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g02636 | 9 | 861 | Receptor kinase-like Gene Family | AT1G53420 | 53.726 | 0.0 | 912 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre11g02636 | Malectin | 1.6e-44 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g02636 | - | - | psat:127081874 | 1321.22 |