Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02633 ATGAAGCTACTATTCCATCTTTTTCTTCTTGCCTTTTGTTTTATCTCTTCATTTGCTACTGGAGCTACTCTATTAGATGAAGAAGTACAAGTTATGAAAGACATAGGAAGGACACTTGGGAAGAAGGATTGGGACTTCAGCAAAGATCCATGTAGTGGAGAAAATAATTGGACATCTTCTGTAAAAGTGAAAGGGTTTGGAAATGCTGTCACTTGCGATTGCTCTTTTGCCAATGCAACTATCTGCCATATTGTTAGCATTGTTCTGAAGTCACAAAATCTTTCTGGCACACTTCCAAGGGAATTTGTGAAATTGCCTTACCTCCAAGAAATTGATCTCACACGTAACTATCTTAATGGTTCAATTCCACCACAATGGGGTTCCATGATCAATCTTGTCAACATTTCACTATTAGGAAATCGATTAACTGGTCAAATTCCAAAAGAACTTGGAAAAATCACCACCCTCAAAAGCTTGGTTTTGGAGTTCAATCAATTATCTGGAAAGCTTCCTTCAGAGCTTGGGAATCTTCACCAGCTTGAAAGACTGCTTCTTACCTCTAACAATTTTACTGGAAATTTACCTTCAACATTTGCTAAGCTCACTAAATTGAAGCAAATTCGACTCGGCGACAATCAATTCTCTGGAACATTACCTGATTTCATTCAGAGTTGGTCAGGTCTTCAAAGGCTGGTGATGCAAGGGAGTGGTTTGAGTGGCCCAGTTCCTTCTGGAATTTCTTATCTGAAAAACCTCACTGACTTAAGAATAAGTGACTTGAAAGGACCAGATTCTCCTTTTCCGCAACTTATTAAATTAACAATTCTGGAAACATTAGTACTGAGGAGTTGCAATCTTATAGGAACTGTTCCTGCATATCTTGGAAATATTACCACTTTAAAATCATTAGACCTTAGTTTTAACAAATTAAGTGGACAGATTCCGAACACCTTGGGCGTCCTCCAGGACATAAATATACTATACTTAACTGGAAACCTTTTTACTGGACCACTGCCAAATTGGATAGCTAGACCAGACTACACAGATCTATCATATAACAACTTGAGCATTGAAAATCCAGAGCAGTTGACATGTCAACAAGGAACAGTGAACTTATTTTCATCATCTTCAAAGGGAAGTAACTTGGGAATGGTTTCATGTTTGGGGAACAATGGCTGTCCTAAAAAGTCATACTCTCTCCATATCAATTGTGGTGGGAAGCTCATAACTTCTAATACAAGCTTGACATATGACGATGATTCATATGAAGTTGGACCAGCAAGCTTTCACCGGAGTGGTTCGAACTGGGCTCTTAGCAACACTGGTCACTTCTTTGATGGTAGCCTTGGAGGAGACTACTATACCTGGTCTAATAAAGCTAATCTTTCCATCGAAAATGCCGAACTGTATACAGATGCACGTGTTTCTCCTCTTTCTCTAACATATTACGGATTTTGCCTGGGTAATGGAAACTACACAGTAAATCTCCATTTTGCGGAGATAATGTTTACGGATGATCAAACATACAGCAGCCTTGGAAGGCGTATATTTGACATCTATATTCAGGGAAGGTTGGTGCTGAAGGATTTCAATATTGCAAATGAAGCCGGTGGAGTTGGTAAGGCAATTATAAAGAAGTTCACTGCTATTGTGACTAATAATACCTTGGAGATTCGCCTTCATTGGGCTGGGAAAGGGACAACTGCTATTCCATTTGGATCAGTACATGGTCCTCTTATATCCGCTATATCAGTTGATCCAGACTTTACACCCCCGGTGGAAAAAGGAAGTAGCATACCTGTGCGTAATATTGTGGCAATAGTAGTTTCTGGAGCCCTAGTTATCTTATTAGTATTTGGCATAGCTTGGTGGAGAATATGTCGACGAAAGATAGGTCCATTAGAAAGAGAGCTGAAGAGCTTAGACCTTCAAATGGGTTTATTTACCTTGAGACAAATCAAAGAAGCAACAAACAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTATCCAATGGGACATTGATAGCAGTCAAACAACTTTCATCTAAATCAAAGCAAGGGAATCGTGAATTTTTAAATGAGATTGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCTATGGTTGTTGTGTCGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGTCTAGCTCGTGCTTTATTTGGTCCAGAAGAACACCGAATAAGATTAGATTGGTCGACAAGGAAGAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCATAGGGACATCAAAGCCACTAATGTGTTACTTGATACGGATCTCGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGTACTAGAATTGCCGGTACCTATGGATATATGGCTCCGGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAAAGCAACACCCTTTATCAGTTAAAGGAGGAAGCATTTTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGTGACCTAATGGAGCTAGTTGATAGCAAATTAGGTTCAGATTTCAACAAAAAGGAAGTTCTTGTGGTGATCAACGTGGCTCTCCTATGCACCAATGTCACGTCAAACCTTAGGCCGTCTATGTCGTCAGTAGTAAGTATGCTTGAAGGAAGCACTGCGGTTCCCGAATCTGTTCCAGTTTCAAGTGAAGTATTGGATGAAAAGAAGATGGAAGTAATGAGGCAGTATTACTGTCAGATGGAAGAAAATAAGACAAGCAAGTCACAAACACAGAGTCGGCGTTTATTAGATGATGGGCCATGGACTGCTACATCTTCATCAGCTGACCTTTATCCTATCCACCTTGATTCTTCCTATTTGGAGGAGAGAAATTAA 3024 0.3938 MKLLFHLFLLAFCFISSFATGATLLDEEVQVMKDIGRTLGKKDWDFSKDPCSGENNWTSSVKVKGFGNAVTCDCSFANATICHIVSIVLKSQNLSGTLPREFVKLPYLQEIDLTRNYLNGSIPPQWGSMINLVNISLLGNRLTGQIPKELGKITTLKSLVLEFNQLSGKLPSELGNLHQLERLLLTSNNFTGNLPSTFAKLTKLKQIRLGDNQFSGTLPDFIQSWSGLQRLVMQGSGLSGPVPSGISYLKNLTDLRISDLKGPDSPFPQLIKLTILETLVLRSCNLIGTVPAYLGNITTLKSLDLSFNKLSGQIPNTLGVLQDINILYLTGNLFTGPLPNWIARPDYTDLSYNNLSIENPEQLTCQQGTVNLFSSSSKGSNLGMVSCLGNNGCPKKSYSLHINCGGKLITSNTSLTYDDDSYEVGPASFHRSGSNWALSNTGHFFDGSLGGDYYTWSNKANLSIENAELYTDARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRIFDIYIQGRLVLKDFNIANEAGGVGKAIIKKFTAIVTNNTLEIRLHWAGKGTTAIPFGSVHGPLISAISVDPDFTPPVEKGSSIPVRNIVAIVVSGALVILLVFGIAWWRICRRKIGPLERELKSLDLQMGLFTLRQIKEATNNFDISNKIGEGGFGPVYKGCLSNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHRIRLDWSTRKKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTDLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTLYQLKEEAFYLLDWAHMLKERGDLMELVDSKLGSDFNKKEVLVVINVALLCTNVTSNLRPSMSSVVSMLEGSTAVPESVPVSSEVLDEKKMEVMRQYYCQMEENKTSKSQTQSRRLLDDGPWTATSSSADLYPIHLDSSYLEERN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02633 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Trre11g02633 1007 SUPERFAMILY L domain-like 78 355 - -
Trre11g02633 1007 Pfam Protein kinase domain 662 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02633 1007 SUPERFAMILY Protein kinase-like (PK-like) 643 943 IPR011009 -
Trre11g02633 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 968 - -
Trre11g02633 1007 SMART serkin_6 660 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02633 1007 Gene3D - 395 587 - -
Trre11g02633 1007 Pfam Leucine Rich Repeat 300 321 IPR001611 GO:0005515
Trre11g02633 1007 CDD STKc_IRAK 666 933 - -
Trre11g02633 1007 Gene3D Ribonuclease Inhibitor 263 393 IPR032675 -
Trre11g02633 1007 ProSiteProfiles Protein kinase domain profile. 660 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02633 1007 Pfam Malectin domain 399 583 IPR021720 -
Trre11g02633 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 397 588 - -
Trre11g02633 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Trre11g02633 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 942 - -
Trre11g02633 1007 Gene3D Ribonuclease Inhibitor 25 262 IPR032675 -
Trre11g02633 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 28 189 - -
Trre11g02633 1007 Gene3D Phosphorylase Kinase; domain 1 628 735 - -
Trre11g02633 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 194 261 - -
Trre11g02633 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 267 360 - -
Trre11g02633 1007 Gene3D Transferase(Phosphotransferase) domain 1 736 947 - -
Trre11g02633 1007 MobiDBLite consensus disorder prediction 966 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02633 Trre-Chr11 32987733 32998205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02633 15 977 Receptor kinase-like Gene Family AT1G53420 55.293 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02633 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02633 - - gmx:100786496 1503.8