Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02632 ATGAGCACTTCCTCTCAATTTTTCTTGCTTTCACTAATTTTCATTTGGTTCATATCTCTATTGGCTTTTGGAGCTACTACTATTCACCCCGACGAAAAGAAAGCTCTCAAAGCTATAGCTGAATCACTTGGCAAGAAGGATTGGAACTTCGACATAGATCCATGCAGTAACAAACCTAACTGGTCTACACCTAAGCCTACGCCTCTCACTCCCAGATTGAGTATCATAGAGAACAATGTCACCTGCAACTGCAGTGTTGCTGGTGCCAACTTCTGTCATGTTGTTTCAATAACTTTGAAAGGGCAAAATCTCCCTGGCACTCTCCCACCAGAACTGAACAGGTTGCATTACCTTCAATTTATTGACCTCTCTCGCAATTACTTGAATGGTACAATTCCTAAAGAATGGGGATCCATGACGAATCTTCTTAACATTTCTCTCCCCTCAAATCGATTAACGGGTTCAATACCAGTGGAGATTGCAAATATATCTACTCTGATACAATTGGACTTAACGGCCAATCGAATTTCTGATAATATTCCTCGTGAGCTTGGGGATTTGACCCAGATTCGAGCACTGCGACTTTCCTCAAACAATTTTACTGGAGAACTACCTGCAACATTGGCCAAGCTCACTACATTGCTAGATTTCCAAATTTCTGACAACAACTTCTCTGGAAAGATACCTGATTTTATTCAGAACTGGACAAATATCAATTCGCTATCCATTCAAGGGAGTGGATTAAGTGGCCCAATTCCTTCTGAAATTTCACTTTTGAGAAACATAACTGATGTGAGAATAAGTGATTTGAATGGATTTGAATATGCACCTTTGCCACAATTTAATAAAATGCCATTGTTAAAAAATCTGATTCCGAGGAACTGCAAAATCAATGGGACACTGCATGATTATCTTGGGACTATAGCAACATTAAAACACTTAGACCTCAGCTTTAACAACATAAGTGGAACAATTCCGAGTACCTATGCTGAAACAAACGGTGTGAAATTCATATTTTTAACTGGAAACCTTCTCACTGGATCGTTGCCTGATTGGAGAAGAAACATCGACGTAGATATTTCATACAATAATTTAAGCATGAGCCAAGGGAGTCAGATATGTCAAAGTGATAAAGTGAACTTGTTTTCTCCAACATTGGCACACAATAACATGGGAACAGATTCGTGTTTGAGAGTATGTACCAAACCCTTGTACTCCCTTTATATAAATTGTGGTGGAAACGAAGCAACAGTCAACGGAAAAATTTATAATTATGATTCGGATTCATCTGGACCAGCTAAGTTCCATGTCAGTCCAACAGGAAATTGGGCATTTAGCACCACTGGTATATTCATTGATGGTGATCAACTTGGAGAATTTTATCTCCCGCAAAATATCACTACACTTACTATGGCAGATTCTGAATTGTACATGACTGCACGTGGTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAGCTACACAGTGAAACTACATTTTGCTGAAATAATGTTCACAGATGATCAAACATATGGTAGTCTAGGAAGGCGGGTATTTGATATCTACCTTCAGGGAAAGGTGGTGCAAAAGGACTTCAATATTGCAGAAGAAGCCGGAGGAGTTGGTAAGAAAGTCATAAAACTGTTCAAAGGTGTTGATGTTACTAGTAATACCTTAGAGATCCGCCTGTATTGGGCTGGAAAAGGGACACAGTCTCTCCCAAATAGATCAGTATATGGTCCTATTATATCAGCAATATCTGTGGAATCTGACTCTCCACCTGGAAGCATATCTACAGGAGCTGTGGTTGGAATTGTGGTTGCAGCATCAGTTGTTATTATCATTCTAGTATTTGGTATTCTCTGGTGGAAGGGATGTTTTGGCAAGAAAAACACATTAGCAAGAGAGCTAAATAATTTAGACGTACAGACGGGTTTATTTAGCTTGCGACAAATCAAAGCAGCGACAAATTACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTCAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAATTTTTAAATGAGATAGGCATGATTTCGGCTTTGCAACATCCTTATCTTGTTAAACTCTACGGTTGCTGTATGGAGGGGGATCAGTTGTTGCTGATATATGAATACTTGGCAAACAATAGTCTAGCTCGTGCTTTATTCGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCTACAAGGCAGAAGATTTGTGTTGGCATTGCTAAAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTCCACAGGGACATCAAGGCCACTAATGTATTGCTGGATACGGATCTCAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTGGATGAGGAGGAAAATACTCACATTAGTACTAGAATTGCTGGGACCTACGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTACAGTTTTGGAATTGTTGCCTTGGAGATCGTTAGTGGAAGGAGCAATACCATGCATCGGGCAAAGGAGGAAGCATTCTATATTCTTGATTGGGCACATTTGTTGAAAGAGAGAGGTGACCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAAGAAGCTATGGTGATGATCAATGTAGGTCTTCTATGCACCAATGTAACTTCAACTCTTAGGCCCTCCATGTCGTCAGTTGTAAGTATGCTCGAAGGAAGGACTGTGGTTCCAGAATTTGTTTCAGGTTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGACAGCATTACCATCAGATTGAGGAATCTACGATAACTAAGTCACAAACACAAAGTCAAAGTTTATCAATTGACGGGCCATGGACTGCTTCATCTTCATCAACTGTAGACGTTCCGCAATGA 3003 0.3976 MSTSSQFFLLSLIFIWFISLLAFGATTIHPDEKKALKAIAESLGKKDWNFDIDPCSNKPNWSTPKPTPLTPRLSIIENNVTCNCSVAGANFCHVVSITLKGQNLPGTLPPELNRLHYLQFIDLSRNYLNGTIPKEWGSMTNLLNISLPSNRLTGSIPVEIANISTLIQLDLTANRISDNIPRELGDLTQIRALRLSSNNFTGELPATLAKLTTLLDFQISDNNFSGKIPDFIQNWTNINSLSIQGSGLSGPIPSEISLLRNITDVRISDLNGFEYAPLPQFNKMPLLKNLIPRNCKINGTLHDYLGTIATLKHLDLSFNNISGTIPSTYAETNGVKFIFLTGNLLTGSLPDWRRNIDVDISYNNLSMSQGSQICQSDKVNLFSPTLAHNNMGTDSCLRVCTKPLYSLYINCGGNEATVNGKIYNYDSDSSGPAKFHVSPTGNWAFSTTGIFIDGDQLGEFYLPQNITTLTMADSELYMTARGSPISLTYYGFCLANGSYTVKLHFAEIMFTDDQTYGSLGRRVFDIYLQGKVVQKDFNIAEEAGGVGKKVIKLFKGVDVTSNTLEIRLYWAGKGTQSLPNRSVYGPIISAISVESDSPPGSISTGAVVGIVVAASVVIIILVFGILWWKGCFGKKNTLARELNNLDVQTGLFSLRQIKAATNYFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCMEGDQLLLIYEYLANNSLARALFGPEEHQIKLDWSTRQKICVGIAKGLAYLHEESRLKVVHRDIKATNVLLDTDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTMHRAKEEAFYILDWAHLLKERGDLMELVDRRLGSDFNKKEAMVMINVGLLCTNVTSTLRPSMSSVVSMLEGRTVVPEFVSGSSEVMDEKKLEVMRQHYHQIEESTITKSQTQSQSLSIDGPWTASSSSTVDVPQ 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02632 1000 MobiDBLite consensus disorder prediction 968 1000 - -
Trre11g02632 1000 MobiDBLite consensus disorder prediction 969 1000 - -
Trre11g02632 1000 Gene3D Ribonuclease Inhibitor 198 272 IPR032675 -
Trre11g02632 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 974 - -
Trre11g02632 1000 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 596 - -
Trre11g02632 1000 Pfam Malectin domain 406 591 IPR021720 -
Trre11g02632 1000 ProSiteProfiles Protein kinase domain profile. 664 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02632 1000 Gene3D - 405 596 - -
Trre11g02632 1000 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 204 - -
Trre11g02632 1000 Gene3D Phosphorylase Kinase; domain 1 632 739 - -
Trre11g02632 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Trre11g02632 1000 SUPERFAMILY Protein kinase-like (PK-like) 646 946 IPR011009 -
Trre11g02632 1000 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Trre11g02632 1000 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 739 - -
Trre11g02632 1000 Pfam Protein kinase domain 666 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02632 1000 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 946 - -
Trre11g02632 1000 SUPERFAMILY L domain-like 70 411 - -
Trre11g02632 1000 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 205 271 - -
Trre11g02632 1000 Gene3D Transferase(Phosphotransferase) domain 1 740 946 - -
Trre11g02632 1000 Gene3D Ribonuclease Inhibitor 273 395 IPR032675 -
Trre11g02632 1000 SMART serkin_6 664 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02632 1000 CDD STKc_IRAK 670 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02632 Trre-Chr11 32978414 32986917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02632 25 973 Receptor kinase-like Gene Family AT1G53420 52.905 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02632 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02632 - - gmx:732563 1275.38