Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02604 ATGTTTTTTCTCATGTCAAGAAGCTTCAAACATGTATCTTTGTTCTTCTTTTTGTTCATGGCTTTCTCAATATTTGGATCCAACTCTCAACTCTTACCACAAGATGAAGTGAAATTGCTACAAACAATATCAGACAAGGTACATAATTTGAATTGGAAGGTTACACAACGTTCTTGCAATGGGGATAGTGGATTTGGTAACAAGATTATTGTAAATGATCAAATTACAAGAAATGTCACGTGTGATTGTTCTTTCAATGCTAGCACTATTTGCCATGTGACAATGATCTTGCTGAAGGGTCTCAATATATCTGGAGTTTTTCCTAGTGAATTTGGAAATCTCACTCAACTCAAAATACTCGATCTAACTCGGAATTATCTAAATGGCTCAATTCCAAAGAGTCTCGGACACCTCCCACTTGTGACATTTTCACTTTTGGGAAATCGACTTAGTGGTCAAATTCCCTCAGAAATTGGTGATATTGTCACTCTGCAAGAACTGAATTTTGAGAATAATCACCTTGAAGGGCCTCTTCCTTCCAGCCTCGGAAACTTGAAGAACTTGCAAAAATTCATGCTTTCTGCAAATAATTTTACAGGACCAATACCAGAAGCATTTGGAAATCTTAAGAATCTCACTCAATTTAGGATCGATGGAAGCAGTTTATCCGGAAAGATCCCGAGTTTTATCGGAAACTGGACGAAAATCGAAAGATTGGATTTGCAAGGTACATCCATGGAAGGTCCAATTCCTCCTGCTATATCTCTCTTGAAAAATTTGAAGGAATTGAGAATATCTGATTTGAAGGGACAAACAACGACGAAATTTCCTGATCTGAAGGATTTGAAACGCATGGTTAGACTGGAATTGAGGAATTGCTTAATCACCGGTCCTATTCCGGACTACATCGGTGAACTGGAAAATTTAAAAACTATAGATTTGAGCTCCAACAGATTGACCGGTCCAATTCCAGATTCACTTCAGGACTTGGAGTTCGAAGCACTTAACTTCGTGTTTCTTACTAACAACTCTCTGAGTGGAACAATTCCCGGATGGATAGTGAGCAACAAACAGCACTTTGATTTATCTTTCAACAATTTTACCGAGGCTGATACATCTACTTGCCAGCCCTTGGATGTGAACTTAGCTTCCAGCTTCTCTCCTTCATCAAACACTACATTGACTTGTTTGAAGATGAACCTACCTTGTTCGGGAAAACCTCGGTATCATTCGCTGTTCATAAATTGTGGAGGACCTGCTACCGAGTTTGATGGCAATGAATATGAAGCCGATGGACATTTACGTGGAATTTCGAACTTTTTTCCTAGTGATGACGGAAAATGGGCTTATAGCAGCACAGGAGTATTTCTCGGAAATGAAAGAGCTAATTATGTGGCAAGCAATGCATTCTCTTTGAATATCAATGGCTCTGAATACTACCAAACAGCCCGCATTGCTCCGATATCTCTTAAATACTTTGGCCTTTGTATGATGAAAGGAAATTATAATGTGAAACTTCATTTTGCTGAGATAATGTTTTCTAATGATCAGACATATAGCAGCCTTGGAAGGCGCATATTTGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATTATGGAAGCAGCTGGTGGAGTTGGCAAGGGAATCACTAAGGAGTTTAATGTTGATGTTAATCAAAGCACTTTGGAAATCCACTTATCTTGGGCAGGGAAAGGAACTAATGCCATTCCTATGAGAGGTGTATATGGACCTCTTATATCTGCTATCACTGTCACCCCAAACTTTAAAATTCCTTCAAATGGGCTGTCTGCTGGAGCGATTGCTGGTATTGTGGTTGGATCATTGGCGCTTATCATTCTTATACTCTTTGTCCTTTGGAAGATGGGTTATATCTTTAGGAAGGATCAAACAGACAAAGAGCTCCTAGAATTAAAAACAGGTTATTATAGTTTGAGACAAATTAAAGCTGCTACTAATAACTTTGATCCAGCGAATAAGATAGGCGAAGGAGGATTTGGTCCTGTTTACAAGGGTGTACTGTCAGATGGTGCTGTCATTGCTGTTAAACAGCTCTCTTCCAAATCAAAGCAAGGAAACCGCGAATTCGTTAATGAAATAGGTATGATATCGGCTTTGCAGCATCCGAATCTTGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAATTGCTGCTTGTGTATGAGTACATGGAGAACAATAGTCTTGCTCGCGCTCTTTTCGGTAAACCGGAACAAAAGTTGAACTTGGACTGGAGCACGAGAATGAAGATATGTGTCGGGATAGCAAGAGGTTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTTCACAGGGATATTAAAGCGACCAATGTCTTACTCGATAAGAATCTGAAAGCCAAGATCTCTGATTTTGGTTTAGCCAAGCTTGATGAAGAAGAAAATACTCATATCAGCACGCGAATAGCTGGGACAATAGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACCGACAAAGCAGATGTCTATAGCTTCGGAGTTGTAGCCTTAGAGATTGTCAGCGGAATGAGCAACACAAATTATCGGCCAAAAGAAGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAACAAGGAACCCTTCTAGAATTAGTGGATCCAAGTCTTGCTTCAAACTACTCACCAGAAGAGGCCATGAGAATGTTGCAATTGGCACTCCTTTGCACGAATCCATCGCCAACTCTTAGACCACCAATGTCATCTGTAGTTAGCATGCTTGAAGGAAATACACCGATTCAAGCATCGATAATCAAACGAAGCAATAGTTCAGATGGTGCAAGATTCAAAGCCTTTGAACTTCTATCACAAGATAGTCAAACTCATGTTTCATCAACATTCTTACCAAATAGTAAAGAGGGACCATGGATTGACTCTTCTGTATCTTATCCAAGTAAAGATGGTTATTCTTCATCTGATAAGCTTATTTGA 3018 0.392 MFFLMSRSFKHVSLFFFLFMAFSIFGSNSQLLPQDEVKLLQTISDKVHNLNWKVTQRSCNGDSGFGNKIIVNDQITRNVTCDCSFNASTICHVTMILLKGLNISGVFPSEFGNLTQLKILDLTRNYLNGSIPKSLGHLPLVTFSLLGNRLSGQIPSEIGDIVTLQELNFENNHLEGPLPSSLGNLKNLQKFMLSANNFTGPIPEAFGNLKNLTQFRIDGSSLSGKIPSFIGNWTKIERLDLQGTSMEGPIPPAISLLKNLKELRISDLKGQTTTKFPDLKDLKRMVRLELRNCLITGPIPDYIGELENLKTIDLSSNRLTGPIPDSLQDLEFEALNFVFLTNNSLSGTIPGWIVSNKQHFDLSFNNFTEADTSTCQPLDVNLASSFSPSSNTTLTCLKMNLPCSGKPRYHSLFINCGGPATEFDGNEYEADGHLRGISNFFPSDDGKWAYSSTGVFLGNERANYVASNAFSLNINGSEYYQTARIAPISLKYFGLCMMKGNYNVKLHFAEIMFSNDQTYSSLGRRIFDVSIQGFKYLKDFNIMEAAGGVGKGITKEFNVDVNQSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVVGSLALIILILFVLWKMGYIFRKDQTDKELLELKTGYYSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKPEQKLNLDWSTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLKAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGTLLELVDPSLASNYSPEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQASIIKRSNSSDGARFKAFELLSQDSQTHVSSTFLPNSKEGPWIDSSVSYPSKDGYSSSDKLI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02604 1005 SUPERFAMILY Protein kinase-like (PK-like) 649 937 IPR011009 -
Trre11g02604 1005 SUPERFAMILY RNI-like 91 324 - -
Trre11g02604 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Trre11g02604 1005 ProSiteProfiles Protein kinase domain profile. 665 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02604 1005 Gene3D Transferase(Phosphotransferase) domain 1 741 955 - -
Trre11g02604 1005 Gene3D Ribonuclease Inhibitor 37 163 IPR032675 -
Trre11g02604 1005 Gene3D Ribonuclease Inhibitor 164 230 IPR032675 -
Trre11g02604 1005 Pfam Protein tyrosine and serine/threonine kinase 669 935 IPR001245 GO:0004672|GO:0006468
Trre11g02604 1005 Gene3D Phosphorylase Kinase; domain 1 632 740 - -
Trre11g02604 1005 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 36 201 - -
Trre11g02604 1005 Pfam Malectin domain 412 593 IPR021720 -
Trre11g02604 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 370 - -
Trre11g02604 1005 CDD STKc_IRAK 671 938 - -
Trre11g02604 1005 Gene3D - 410 598 - -
Trre11g02604 1005 Gene3D Ribonuclease Inhibitor 231 396 IPR032675 -
Trre11g02604 1005 SMART serkin_6 665 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02604 1005 MobiDBLite consensus disorder prediction 973 1005 - -
Trre11g02604 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 740 - -
Trre11g02604 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Trre11g02604 1005 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515
Trre11g02604 1005 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515
Trre11g02604 1005 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Trre11g02604 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 598 - -
Trre11g02604 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 967 - -
Trre11g02604 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 202 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02604 Trre-Chr11 32646462 32656642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02604 2 996 Receptor kinase-like Gene Family AT1G53440 61.637 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g02604 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02604 - - gmx:121173337 1536.16