Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02594 ATGTTAAAATGGGATATTCGTGATACTGATATCGAAAAATTGAAAGACAAATGGATTTCCTATGCGGATAAAAATATTGTTCTTATTGTTGATTCAGCTATAAATAGCTATAAAATGTTGAAAGGTTCAAGAAAACAAAGAAAGCCAACATGGAACATTATTCTCACGTGCCAAAGACAATCTTTCAGTTATGAGAGTGGTTACTATGTTATGATACATATGTTGAACATTGTATCGGCCGGTATTGTTAACTCATGGAATCAGGTATTTGGAGACTCGACACCATTTGATGAGGACGAAGTTTCAAATATTCAAGAACGTTGTGCAAATTCGATTCTTGAATTTTATTTCATCAATATTATTTCGGTTGTTGCCGTTCATGCCCAAAACTCTCTGCGAAGTTTGCATGATCAGATATTCAAGCTAAGCAAGTTACCTACCAGTGCTGACTTTCACTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACCCTTACCATCAAAGGAAAGGGCAACCTCGATACCGTGTGGCTTGAAACTTTGGTGGCTTTAATTGGGGAGCAATTTGGAGACTCTGAGGATATTTGTGGCGTAGTTGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAAACAGCAGCTAATGAGTCTGTCCAGGTAGAAAACCTTCACAATGTAAGGGAAGTATCAAACTGTTATGGTGAATGTTGGTAA 753 0.3851 MLKWDIRDTDIEKLKDKWISYADKNIVLIVDSAINSYKMLKGSRKQRKPTWNIILTCQRQSFSYESGYYVMIHMLNIVSAGIVNSWNQVFGDSTPFDEDEVSNIQERCANSILEFYFINIISVVAVHAQNSLRSLHDQIFKLSKLPTSADFHLFKDGIEPKWEDPECANGGKWTLTIKGKGNLDTVWLETLVALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTAANESVQVENLHNVREVSNCYGECW 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02594 250 ProSitePatterns Eukaryotic initiation factor 4E signature. 150 173 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Trre11g02594 250 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 119 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre11g02594 250 Pfam Eukaryotic initiation factor 4E 110 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre11g02594 250 SUPERFAMILY eIF4e-like 116 231 IPR023398 -
Trre11g02594 250 Gene3D RNA Cap, Translation Initiation Factor Eif4e 8 246 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02594 Trre-Chr11 32389085 32395539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02594 135 231 Eukaryotic Initiation Factors Gene Family AT5G35620 64.356 4.61e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02594 K03259 - tpra:123886299 167.548