Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02555 ATGGAAAGCTTTGGAGAAAGGTCAAGTGCACCAACTTGGGAAAAGACAACCTCAATATTGATTGATGATGGTCATACATGGAGAAAGTACGGCCAAAAAAGGATAACCAATGCCAAATTCATCAGGAGCTACTATAGATGCACTCACATGTACGATCAACATTGTGAAGCAATGAAACATGTTCAACAAACACAAAATAACCCTCCATTGTACCGAACTACATATTATGGCCATCACACTTGCAAAAGCAATTTTCAATCCAATATAAATTTTGAACCCATTTTGTCATCTGACTCTTCTATAATTAGTTTTGATAACAACATTCTAGACAACCAAGAACATCCATTTCGGTCATCACCATCATTGCCACTTCTTGCATCTGTAAAAGGGGATCCCAAAGAAGTGATCTATGACGATCCTTTTACGCCAAATCAATTGTGCTCGTCAGAAAACCTCCAATTATGTGATTTTGATGTTTATTTTGATTATTTGAAACATGCTACTATGCAATTATAG 516 0.3624 MESFGERSSAPTWEKTTSILIDDGHTWRKYGQKRITNAKFIRSYYRCTHMYDQHCEAMKHVQQTQNNPPLYRTTYYGHHTCKSNFQSNINFEPILSSDSSIISFDNNILDNQEHPFRSSPSLPLLASVKGDPKEVIYDDPFTPNQLCSSENLQLCDFDVYFDYLKHATMQL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02555 171 ProSiteProfiles WRKY domain profile. 16 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g02555 171 Pfam WRKY DNA -binding domain 22 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g02555 171 SMART WRKY_cls 21 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g02555 171 Gene3D WRKY domain 8 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre11g02555 171 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 92 IPR044810 GO:0003700
Trre11g02555 171 SUPERFAMILY WRKY DNA-binding domain 16 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02555 Trre-Chr11 31739011 31741378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02555 22 83 WRKY Transcription Factor Family AT1G66560 61.290 2.22e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre11g02555 WRKY 9.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02555 - - psat:127081893 202.601