Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02550 ATGGAACAAGAGCTAATTAGAGGACGTGAGGCAGCAAATGAATTACTTGAAGTAATTGTGAACAAATTCAGTACTAATCCTCATTACCATGGAGATTTAGAAGGGTTAAAAATACCCTTAGCGCAAGATCTTGTTAACAAGGTACTTAGATCATTCACAAATACTCTTTTTCTTTTGAACACTAATAATGATGTCTTCAGTGATGAGGAAGTGTTGCCTATTACTTCTATCAAAGATTTGTCATCACCAGCAAAGTGTCCAAAGCTTGAAGAAACAGATCATGAAGCTTGCAAGAGTTTTAAACTTCAAAGAGGGTGCTACAAAAGAAAGTCAAATGCAGTTACTTGGGAGAAGGATAGCTCAATTTTGATTGAAGATGGCTATGAATGGAGAAAATATGGACAGAAAAAGATAATGAAGGCAAAATATCTCAGGAGCTACTACAGATGCAGCTACAAATGTGAACAAGATTGTGCAGCTATGAAACAAGTACAAAGAATTCAAGAGGAACCTCCATTGTACAGAACCACATATTATGGCCATCATAATTGCAAAACCTCTTTATCAAATTCAGAAATCACATCATTGGAACCTAATAATAATTCATCTATGTTCATTAACTTCAATGATAGCTTCCAAACCAAAGAACAATTCCCTTCATTTTCATCATCATCAGTTTCTAAATCCACAAAACAGGAGCCTATAGATCAAGTTATTAATCCCTATCATAATCACATTGCTCAAAACCAATTAATCTCATCAGATTATTACCCTCTCTCATGTGATTATGAACCTGAATTTGATTATTTTAGGCATGCTACTATGCTATCATCCCCTCAATCTGTTGAATTTGATTCCAAAGCATTTTTTGGTCTATAA 879 0.3436 MEQELIRGREAANELLEVIVNKFSTNPHYHGDLEGLKIPLAQDLVNKVLRSFTNTLFLLNTNNDVFSDEEVLPITSIKDLSSPAKCPKLEETDHEACKSFKLQRGCYKRKSNAVTWEKDSSILIEDGYEWRKYGQKKIMKAKYLRSYYRCSYKCEQDCAAMKQVQRIQEEPPLYRTTYYGHHNCKTSLSNSEITSLEPNNNSSMFINFNDSFQTKEQFPSFSSSSVSKSTKQEPIDQVINPYHNHIAQNQLISSDYYPLSCDYEPEFDYFRHATMLSSPQSVEFDSKAFFGL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02550 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 207 IPR044810 GO:0003700
Trre11g02550 292 ProSiteProfiles WRKY domain profile. 119 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g02550 292 SUPERFAMILY WRKY DNA-binding domain 121 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre11g02550 292 Gene3D WRKY domain 107 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre11g02550 292 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g02550 292 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02550 Trre-Chr11 31628571 31638918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02550 42 285 WRKY Transcription Factor Family AT3G56400 32.794 3.39e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre11g02550 WRKY 4.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02550 - - gmx:102663141 288.5