Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02540 ATGTTTATGCAGTTCCTTCCTTGGTGTGGCTTTGGTGAATCCGCGTTTTCTCATGTATTTTCTGATTTGATCTTAGTCGACAATGCTGGGAATCAATATATGTGTGTTTTGAAGATTGATGTGGACTCTAGCGGAGAATTGGCTTTTAATCTTTCTGGTGGTTGGACTGATTTCTGCACAGCTCATGGCCTCCTTGTGGGTGATAGGGTGAAGTTTAGTGTTGCTCAGTACATTGCCAGCAATGTCATGTATGCATTTGTTTATCCAAGGGTTAGGGTGGAGGAGTATTTGAAAAGTAGTAATGGGGAAGAATAG 315 0.4159 MFMQFLPWCGFGESAFSHVFSDLILVDNAGNQYMCVLKIDVDSSGELAFNLSGGWTDFCTAHGLLVGDRVKFSVAQYIASNVMYAFVYPRVRVEEYLKSSNGEE 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02540 104 SUPERFAMILY DNA-binding pseudobarrel domain 22 75 IPR015300 -
Trre11g02540 104 Pfam B3 DNA binding domain 22 75 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02540 Trre-Chr11 31430977 31431291 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre11g02540 B3 2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02540 - K12035 tpra:123889462 97.8265