Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02507 ATGAGAAATGTTTTTTTTCCTATTGGAAAAGAGGAGGAGGCACGTGAATACCTCCCTAGAATTCTAATGCATGCTAGTGGGCATAAGCCTAATATGGAAGCAGAATCTAGCACTAAAACTTCTAAGCCAAAAAGTAAGCTAATCAAGAGAGATATTTTTGAAGTTGAAGAAGAAAATGTGCCATCAACACTTAAAGAAGAAGTCATATTTGGGGATGCAAGTAATTTACCTCAAGCTTTCTTCTTTGAATATGATAATTTACCTCCAAACTATGGGATTTGGACATTCAGATTGGGAACTACTGTCAATGATGGAGGAAGTTTATCCTTGCCGCAAATTACTTCATGTTATGCACAAATGAGGGATCTTAGTGTGCCAATCTCCTATATTTACAAGTTTTTGAGCAAGAAAATTGAATTTGTGAGCGAAGAAGAGGTTGAAATTAAATGTATGGGAAGACTTGTACTACCAACAACAACAGCACATGAATTGGTTAACTTTTGGCTGACTATAAACGAAAAAGGAGATGGTACAGAATATGATCGTCTCATGGTCTATCTAAAATATGGTCGGAAGGTTTTAGCACCCTCTTCTTGA 597 0.3635 MRNVFFPIGKEEEAREYLPRILMHASGHKPNMEAESSTKTSKPKSKLIKRDIFEVEEENVPSTLKEEVIFGDASNLPQAFFFEYDNLPPNYGIWTFRLGTTVNDGGSLSLPQITSCYAQMRDLSVPISYIYKFLSKKIEFVSEEEVEIKCMGRLVLPTTTAHELVNFWLTINEKGDGTEYDRLMVYLKYGRKVLAPSS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02507 198 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 28 193 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02507 Trre-Chr11 30862291 30863896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02507 110 169 C3H Transcription Factor Family AT3G23060 36.667 5.97e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02507 K16277 - gmx:100778462 92.8189