Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02482 ATGAGTGACTCTGATTTTGAAGATGAGGAAGATACATGTTGTAGGGTGGTTGAAGTGTGGATTGGTTACAACTCTGCAAAATTGAGACAAGTTTATTTAGTAGCTTCAACTCGTCCTGTGATGAAACTTGATCAACCCATTGTTTTCAATTTCAGGTATTTAGGGGAAGTTAAGACGTTTACTCCTACGCAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATTGCTACGAAAAATCTTAATGATGTGGTTCATGACTGTTGCATTGCGATTCGGGTTTATTTTACTGATCTTCAGAGAAGGGCTGTTTTGGATGCTGCAACTATTGCTGGTTTGCACCCACTTCGATTGCTTCATGAAACTACTGCGACTGCATTGGCGTATGGGATTTATAAGACGGATCTGTCCGAAACTGATCCTCTGAATGTGGCTTTTGTGGATATTGGACATGCTAGTATGCAGTTTAAGGAGGAGTACAAAATTGATGTGCTTCAGAATGCTAGGGCATGTTTGAGGCTTAGGGCTGCTTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATTTTGTGGCGCCCTTGAACATTGAGTGCTTGATGGATGAGAAGGATGTGAAGGGTATCATGAAGCGTGATGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTCAAGGGTCCTTTGGAGAAGGCACTTGCTGACGCAGGACTCTCAGTCGATGATATACATATGGTTGAGGTAGTTGGTTCAGGATCTCGTGTACCGGCTATAAACAAAATATTGATTGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAACGCGAGTGAATGTGTTGCTAAAGGAGCTGCATTGCAATGCGCTATTCTTAGCCCAACGTTTAAAGTCCAAGAATTTCAGGTCAACGAAAGCTTTCCCTTTTCAATTTCTCTTGCATGGAAAGGTTCTGGTCTAGATGCACAGGATAGTGTACCTGATAATCAGCAGAATTCACTTGTTTTTCCCAAGGGTAATCCTATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCCATTGATGTACAATACAGTGATGTGAGTGGGCAACAAACCCTTGCAAAGATCAGCACATATACGATCGGTCCTTTTGATGTTAAGCAAAGCGAAAATGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGTTTTTGTTGACCTGGAAACTCTCCTCAAAGAGGAAGAAGTTGAGGCTTCAGTTTCCAAAGAATGGATCCTCCTCCGCCTTCGTCAGCCTCCATCTGCCTCGTTCATAGCTCGTATGACGCCAAAAAGAAGAAAATTTGAGCCTACACCGGCTGCGGACCATCCCAGCCATAGTCCTCCCGCACCGACGGATGAGCATACACCAGCTATGAGCCATCATGAACCTCCACATCCCGAAGCTAGACTTTCAATCAACGATCCAGTGAAAAGTCAAGGAAATTTTCACAAAAATATTAGAAAAGAGCATCGATTGGAATCGGATGACGGGCGCGAATATACAAGAGGTGACATGTATGGACCCTCACACAAGAGAAACAATGGATCATTTGTAAATGCGGAAGCACAGAAAAACAGTGTTTCAGACATGGATGCTCCTACAAGAGGATGA 1650 0.4303 MSDSDFEDEEDTCCRVVEVWIGYNSAKLRQVYLVASTRPVMKLDQPIVFNFRYLGEVKTFTPTQVFAMMLSNMKEIATKNLNDVVHDCCIAIRVYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLSETDPLNVAFVDIGHASMQFKEEYKIDVLQNARACLRLRAACEKMKKMLSANFVAPLNIECLMDEKDVKGIMKRDEFEELSLPILERVKGPLEKALADAGLSVDDIHMVEVVGSGSRVPAINKILIEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVQEFQVNESFPFSISLAWKGSGLDAQDSVPDNQQNSLVFPKGNPIPSIKALTFYRSGTFSIDVQYSDVSGQQTLAKISTYTIGPFDVKQSENAKVKVKVRLNVHGIVFVDLETLLKEEEVEASVSKEWILLRLRQPPSASFIARMTPKRRKFEPTPAADHPSHSPPAPTDEHTPAMSHHEPPHPEARLSINDPVKSQGNFHKNIRKEHRLESDDGREYTRGDMYGPSHKRNNGSFVNAEAQKNSVSDMDAPTRG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02482 549 Gene3D - 40 61 - -
Trre11g02482 549 Gene3D - 62 133 - -
Trre11g02482 549 Gene3D - 271 284 - -
Trre11g02482 549 MobiDBLite consensus disorder prediction 494 519 - -
Trre11g02482 549 FunFam Heat shock 70 kDa protein 4 58 146 - -
Trre11g02482 549 FunFam Heat shock 70 kDa protein 4 148 223 - -
Trre11g02482 549 MobiDBLite consensus disorder prediction 525 549 - -
Trre11g02482 549 SUPERFAMILY Actin-like ATPase domain 19 133 IPR043129 -
Trre11g02482 549 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 294 416 IPR029047 -
Trre11g02482 549 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 297 443 IPR029047 -
Trre11g02482 549 PANTHER HSC70CB, ISOFORM G-RELATED 155 434 - -
Trre11g02482 549 MobiDBLite consensus disorder prediction 437 549 - -
Trre11g02482 549 Pfam Hsp70 protein 151 420 IPR013126 GO:0005524|GO:0140662
Trre11g02482 549 Gene3D Actin; Chain A, domain 4 155 223 - -
Trre11g02482 549 Gene3D - 224 270 - -
Trre11g02482 549 Gene3D - 134 154 - -
Trre11g02482 549 SUPERFAMILY Actin-like ATPase domain 151 290 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02482 Trre-Chr11 30084716 30091118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02482 44 348 Calmodulin-binding Proteins AT1G16030 30.058 2.67e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02482 K09489 - gmx:100780156 570.852