Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g02476 | ATGTCTTCTTCCACCAACATCCGTGAGAACTTTGTCTATGTTGCCAAGCTAGCAGAACAAGCTGAACGCTATGATGAAATGGTGGAATCAATGAAGAAACTGGCGAAGATGGATGTTGAATTGAGTGTGGAAGAGAGAAACTTGTTCTCCGTTGGGTACAAGAATGTGGTGGGGTCAAGGAGAGCTTCATGGAGGATCCTATCATCAATAGAGCAGAAAGAAGAATCGAAAGGAAACGAATCGAACGTTAAGCGTATTAAGGATTACCGGCAGAAGGTGGAGTTGGAGTTGTCCAACATTTGCAATGACATTATGATTCTTTTAGATGAGCATCTTATTCCATCGACTAATATCGCTGAATCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCTGAATTTAAAGATGGTAATGAAAAGAAAGAGGTAGCTGATCAGTCACTTCAAGCATATCAGACAGCTTCTGCCACTGCTGAGAATGAATTACAACCTACGCATCCTATCCGATTGGGTCTGGCTCTAAATTTCTCGGTGTTTTATTATGAGATATTGAATTCACCTGAAAGGGCATGTCACCTTGCCAAGCAAGCTTTTGATGATGGTGTCTCAGAGCTGGATACCCTAAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTAATTTATGGACTTCTGATATCCCAGAAGATAGCGAGGAACAGAAAATTGAAAGCGCAGCTAGGACCGGTCAAGATGAAGATGAATTGGGCCGCTAA | 792 | 0.4129 | MSSSTNIRENFVYVAKLAEQAERYDEMVESMKKLAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNESNVKRIKDYRQKVELELSNICNDIMILLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKDGNEKKEVADQSLQAYQTASATAENELQPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDGVSELDTLNEDSYKDSTLIMQLLRDNLNLWTSDIPEDSEEQKIESAARTGQDEDELGR | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g02476 | 263 | PIRSF | 14-3-3 | 2 | 249 | IPR000308 | - | |
Trre11g02476 | 263 | PANTHER | 14-3-3 PROTEIN | 8 | 239 | IPR000308 | - | |
Trre11g02476 | 263 | Pfam | 14-3-3 protein | 15 | 236 | IPR023410 | - | |
Trre11g02476 | 263 | MobiDBLite | consensus disorder prediction | 240 | 263 | - | - | |
Trre11g02476 | 263 | Coils | Coil | 14 | 34 | - | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 209 | 238 | IPR000308 | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 40 | 69 | IPR000308 | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 120 | 142 | IPR000308 | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 182 | 208 | IPR000308 | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 89 | 113 | IPR000308 | - | |
Trre11g02476 | 263 | PRINTS | 14-3-3 protein zeta signature | 155 | 181 | IPR000308 | - | |
Trre11g02476 | 263 | FunFam | 14-3-3 protein epsilon | 4 | 249 | - | - | |
Trre11g02476 | 263 | SUPERFAMILY | 14-3-3 protein | 8 | 238 | IPR036815 | - | |
Trre11g02476 | 263 | SMART | 1433_4 | 8 | 249 | IPR023410 | - | |
Trre11g02476 | 263 | Gene3D | - | 1 | 251 | IPR036815 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g02476 | Trre-Chr11 | 29828026 | 29831905 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g02476 | 8 | 260 | 14-3-3 family | AT2G42590 | 73.725 | 6.60e-141 | 395 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g02476 | K06630 | - | gmx:100806167 | 461.07 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre11g02476 | 11 | 29828026 | 29831905 | Trre11g02476 | 11 | 29828026 | 29831905 | ECH |