Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02464 ATGGATAATTGTAGAGATGCTAATGATGTTGAAATGAACAATGGTAATGATATGCATAATGAGGAAGGAGAAGAGGATTTGGATGGTTACACACCTATAGATCAATTCACAGATGATGATATAAGAGAGATGGAATTTGATTCAGAGCAAAAAGTTGTTGATTTTTATGAAATACGAGGTAAGAGACATAAAAAACATATGTTGCGGGTGGACCGAAGCAGGGTGCCGAGGCCAATTACTCGAACAGATTGTCGTGCTCGGATTCATGTGGCATATAATGTTGAGACAAGGCATTGGAGAGTTGTTGCATTTGAGTCCGCTCATAATCATGAGTTAACTCCACGACGTTTCGTTCATTTTATTCCCAAGTATCGTCAATTGAGTGAAGCGGATAAAGCGCTTGTTGATGGCTTGCATACATGTGTAGTTATAACATGTCATATTTTGGGTTTTATGATGGCTAAGAAAGGTGGTCATGAAGGTTTGGGATTCATCAAGAAATACCTATATAACTACTTTAGTAATAGAGCATGCTTACAATCGTCGCTGTTATCTAGCTTTATATATGTTCATGCTGAAAAAGAGAAGTCCAACAGGCCTAAGGAGAACATGCCAGATACAAATAAACAAGACATTCCAATGGCTAGTGCTTTTGTCACTCCAAATCACTCATTGAATATTGATAGCAATGTTGAGACATGGTTTTGTATGGTTTTGTATTTGGTAATCCCACTAGTGAAATGGAAGGCCAGTAAGCCACATGGAACTATGGTTTAG 777 0.3797 MDNCRDANDVEMNNGNDMHNEEGEEDLDGYTPIDQFTDDDIREMEFDSEQKVVDFYEIRGKRHKKHMLRVDRSRVPRPITRTDCRARIHVAYNVETRHWRVVAFESAHNHELTPRRFVHFIPKYRQLSEADKALVDGLHTCVVITCHILGFMMAKKGGHEGLGFIKKYLYNYFSNRACLQSSLLSSFIYVHAEKEKSNRPKENMPDTNKQDIPMASAFVTPNHSLNIDSNVETWFCMVLYLVIPLVKWKASKPHGTMV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02464 258 PANTHER OS01G0519700 PROTEIN 59 175 - -
Trre11g02464 258 MobiDBLite consensus disorder prediction 1 31 - -
Trre11g02464 258 Pfam FAR1 DNA-binding domain 63 113 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02464 Trre-Chr11 29593802 29594973 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre11g02464 FAR1 2.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02464 - - tpra:123910662 301.982