Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02430 ATGGGTACCTCTTCTGAAAACGCCGCCGGTGCTGGCCGAGGCACCGCCGTCCCCAAAGAAGTCGACTACGCCAACTACTTCTGCACCTACTCCTTTCTGTACCATCAAAAAGAGATGCTCTCAGATCGTGTTCGAATGGACGCTTACTTCAATGCCGTTTTTGAAAACAAACATCACTTCAAGGATAAGGTTGTTTTGGATGTTGGAGCTGGTAGTGGTATTCTTGCTATATGGTCAGCTCAGGCAGGTGCTAAGAAGGTTTATGCTGTTGAAGCTACTAAGATGTCGGAACACGCTCGTGCACTTGTTAAAGCTAATAATCTCGAGCAAGTAGTCGAAGTTATTGAGGGATCTGTGGAGGATATTACATTGCCAGAGAAAGTTGATGTCATCATATCTGAATGGATGGGTTATTTTCTTCTGCGAGAATCTATGTTTGATTCAGTTATATGGGCTCGTGACCGCTGGCTTAAACCAACAGGAGTAATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGAACTGGGATAGTAGATCAAAAACTGGGTGATTACCAGTCAGCTATGGGTGATTGGCACAACTTCGTCGACGAAACAAAAGCTTTCTATGGTGTTGATATGAGCACTTTGGCGAAGCCTTTTGCAGAGGAGCAGAGGAAGTACTATTTACAGACATCGTTGTGGAGTAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTATAATCAAGGAAATTGACTGTTTGACTGCTACAGTGGCAGAGATAGAAAAAGTTAGATCCAAATTTTCTCTGTCAATAACCATGGAAAACACAAAATTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGTGAGGATCCAGCTGAACATGAGATCGAGTTAACTACTGCTCCTAGTGTAGATTACTGTACACACTGGGGCCAGCAGGTTTTCCTCTTAAATCCTCCTACACATGTTAGTGAAGGTGATGAATTAAGTGTTAATTTTGTAATGAGTCGTTCGAAGGGGAACCATCGTTTGATGGAGGTTGAACTTGGGTGTGAGATTCAAAAGAATTCTGGCAAGCTCGTTGCACCTTTCAAAAATAAGTACTACATCGAATGA 1125 0.4329 MGTSSENAAGAGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLEQVVEVIEGSVEDITLPEKVDVIISEWMGYFLLRESMFDSVIWARDRWLKPTGVMYPSHARMWMAPIRTGIVDQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQTSLWSNLHPHQVIGTAGIIKEIDCLTATVAEIEKVRSKFSLSITMENTKLCGFGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSEGDELSVNFVMSRSKGNHRLMEVELGCEIQKNSGKLVAPFKNKYYIE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02430 374 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 351 IPR025799 GO:0016274|GO:0018216
Trre11g02430 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 359 IPR025799 GO:0016274|GO:0018216
Trre11g02430 374 FunFam Protein arginine N-methyltransferase PRMT10 20 165 - -
Trre11g02430 374 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Trre11g02430 374 FunFam Protein arginine N-methyltransferase PRMT10 167 374 - -
Trre11g02430 374 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 133 - -
Trre11g02430 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 357 IPR029063 -
Trre11g02430 374 Gene3D - 167 374 - -
Trre11g02430 374 CDD AdoMet_MTases 65 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02430 Trre-Chr11 28942549 28946024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02430 25 335 C2H2 Transcription Factor Family AT3G12270 33.133 1.08e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02430 K11434 - gmx:100795134 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02430 11 28942549 28946024 Trre11g02430 11 28942549 28946024 ECH