Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02406 ATGGATGGAAACAAAGACGATGCATTGAAATCGTTGAAAATCGGTAAAGAAGCGTTAGAAAGTGGAGATCGTAATCGCGCTTTGAAGTTTCTTAACAAAGCTCGCCGTCTCGATCCAACTCTTCCAATTGATGATCTGCTTTCCACTATAGACAGCGATGCAGGCGATCATCCAACAGAAGCTGCTGAGCCGCGGTCGAATCAGTCGGATCAACCTTCTATTCGTCGAAGGACTGCTGTTCCGGCGCAGGGGACTTCATCATCGTCGGCGGCGACTTCGTATAGTGAGGAGCAAGTTTTGATTATAAGAGAAATTAAGAGGAAGAAGAATTATTATGATATTTTAGGGTTGGAGAAGAATTGCTCGGTGGATGATGTTCGAAAATCGTATAGGAAACTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCCCCGGGGGCTGAGGAAGCGTTTAAGTCGGTTTCGAAGGCTTTTCAGTGTCTTAGTAATGAGGAGAGTAAGAGAAAGTATGATCTTTCTGGAGAAGATGAGGTTGTTTATGAAAGGCGCGCGGCTGCTAGGCCGGCGGCTAGAGGTTTTAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAATTTCTTCTTTGGAGGAATGGCGCCTGCTGCTAATTTTGGTGGGTTTAGTTTTGGTGGGCCGGGGATGGCTCATCGACAGGCTGCTGCTGATAATGGCTCTGGCGGGTTCAATGTTCGTGCTTTGATTCAGTTGCTTCCGGTGCTTCTTATTTTGCTTCTTAACTTTTTGCCTTCATCGGAGCCAGTGTATACTCTTCAGCAGAACTACCCTTATGAACACCGGCTTACTACACCGAAGGGCGTTAACTACTATGTTAAGTCTACAAAGTTTGAAGAAGATTATCCGTTCGATAGCCGTGAACGTGTTACGATTGAGGAACGGGTTGAGAGGGAATATTTTGGTATTCTTCGCCAGAATTGTCAGTTTGAGATGCAGCGACGCCAATGGGGATATATCCGAGAAACGCCTCACTGTGATATGCTTCGGAAGTTTGATATGGTCCGTTGA 1074 0.4534 MDGNKDDALKSLKIGKEALESGDRNRALKFLNKARRLDPTLPIDDLLSTIDSDAGDHPTEAAEPRSNQSDQPSIRRRTAVPAQGTSSSSAATSYSEEQVLIIREIKRKKNYYDILGLEKNCSVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESKRKYDLSGEDEVVYERRAAARPAARGFNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGGPGMAHRQAAADNGSGGFNVRALIQLLPVLLILLLNFLPSSEPVYTLQQNYPYEHRLTTPKGVNYYVKSTKFEEDYPFDSRERVTIEERVEREYFGILRQNCQFEMQRRQWGYIRETPHCDMLRKFDMVR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02406 357 FunFam Chaperone protein dnaJ 49 106 222 - -
Trre11g02406 357 MobiDBLite consensus disorder prediction 48 93 - -
Trre11g02406 357 MobiDBLite consensus disorder prediction 62 93 - -
Trre11g02406 357 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Trre11g02406 357 PRINTS DnaJ domain signature 112 130 IPR001623 -
Trre11g02406 357 PRINTS DnaJ domain signature 146 166 IPR001623 -
Trre11g02406 357 PRINTS DnaJ domain signature 130 145 IPR001623 -
Trre11g02406 357 Pfam DnaJ domain 110 171 IPR001623 -
Trre11g02406 357 Gene3D DnaJ domain 106 221 IPR036869 -
Trre11g02406 357 PANTHER AT29763P-RELATED 1 352 - -
Trre11g02406 357 SUPERFAMILY Chaperone J-domain 106 226 IPR036869 -
Trre11g02406 357 CDD DnaJ 110 163 IPR001623 -
Trre11g02406 357 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Trre11g02406 357 SMART dnaj_3 109 166 IPR001623 -
Trre11g02406 357 Pfam Domain of unknown function (DUF1977) 266 337 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02406 Trre-Chr11 28687559 28688632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02406 105 182 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.366 1.61e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02406 K09518 - gmx:100788812 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02406 11 28687559 28688632 Trre11g02406 11 28687559 28688632 ECH