Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02384 ATGGGTGGTGGTGGTGGTAAAATTAGAAAGAAGAGAAACCAGTTGAGTAGAATCCATGCATTCTCAAGTGGGAAAACTTCATTCAAAGGTGAACATTCACTAATAGGAGGACCTGGTTTTGGAAGGATAGTTTACTGTGAAGAACAAGAAACTGTTAGCAATGTTGTTCCTCTTGTTGTTGTGGTTGCTGCTACAGTTGGAAAAGAGGCTGTTGAGGATTGGAGAAGGATGAAGCAGGATATCGAGATGAATAACAGAAAAGTTAAAGTCCATAAAGGAGAAGGTGTTTTTGACTACTCTAAATGGCGTGATTTGAAAGTTGGAGACATAGTGAAGGTTGAAAAAGATGAATTTTTTCCTGCTGATCTCATCCTACTTTCATCAAGCTATGAAGATGCAATTTGCTATGTTGAGACAATGAATCTCGATGGAGAAACAAATCTTAAACTCAAACAAGCACTTGAAGAAACTTCCAAATTTCAAGAAGACTCCACCTTCCGAAATTTCAAAGCAATCATTAAATGTGAAGATCCAAATGCATATCTATACTCTTTCATAGGAAACATTGAACTTGAAGATCAACTATATCCGCTTTCGCCTCAGCAGTTACTGCTTAGGGACTCAAAGCTTAGGAACACTGATTTTATATATGGCGTAGTTATCTTTACCGGCCATGATACAAAAGTTATGCAGAATTCGACCGACTCTCCATCTAAGAGAAGCAAAGTCGAGAAGCGAATGGATAAGATAATCTACTTTCTCTTCTCAGTTTTGTTTTTTATTTCTTTTATTGGTTCAATTTTCTTCGGCATTTCAACAAGTGAGGATCTTGAAAATGGAGTAATGAAGAGATGGTACCTCAGACCAGATGATACTACGATCTACTTCAATCCAAAGAAAGCACCGATAGCGGCAATGCTCCATTTCTTGACTGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAAGTCCTTCAAAGCATCTTCGTCAACCACGATGTACACATGTATTATGAGGAAACTGACCAGCCTGCACGCGCTCGTACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACTATTCTTTCGGATAAAACAGGAACTTTGACTTGTAATTCTATGGAATTCGTCAAGTGTTCAATTGCTGGGATCGCCTACGGACGAGGTGTTACAGAAGTTGAGAGAGCTCTAGCAAGGAGAAAAGACTTAGATGGCAATGTTGCAGAGATTTCTGAAGCAAAGTCATCCATTAAAGGTTTTAACTTCATGGATGAAAGGATTATGAATGGAAATTGGGTCAAGGAACCTCATGCCAATGTAATCCAGGACTTCATGCGTTTGTTGGCAGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACCGGTAACGTTTCTTATGAAGCCGAGTCACCGGATGAGTCAGCTTTTGTAATTGCAGCTAAGCAACTTGGATTTGAGTTTTATGAAAGGACTCAGACAACTATTTCCCTGCGCGAGTTCAATTCCATAATAGGCAGGACTATTAGAAGGTCCTACAAACATTTGAATATATTAGAGTTTAGCAGTGCAAGAAAAAGAATGTCTGTTATTGTAAGAGATGAGGAGGGGAAACTACTACTTCTTAGCAAAGGGGCTGACAGTGTCATGTTTGAACGGCTTGGAAAGAATGGAAGGGAGTTTGAAGCAAAGACTAAGCAGCACATTAATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTTGCCTATCGCGAACTTGATGAAGAAGAGTACGATCTTTTCAATAAAGAATTGATGGAAGCCAAGAGCTTAGTAAGTGCGGATCGGGAGCAGATTGTGGAGGAAGTATTAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAATTGGGGTTCCTGAATGCATTGACAAGCTAGCACAAGCAGGAATTAAGTTATGGATTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTGGGGTTTGCTTGTAGTTTACTTAGGCAAGGAATGAAGCAAATTATTATCAGTTCCGACACTCCAAATATCAAATCACTAGAGAAAGTGGAGAACAATTCTGCTGCAGCTTTTGCAATCAAGGCAAACGTTCTTTCTCAATTAAGGGAAGGAAGGGAATTACTTGCTGCATCTAATGTAAAATCTGAGGCATTAGCTCTAGTAATTGATGGAAAGTCTCTCACATATGCACTAGAAGATGATGTAAAAGACTTGTTTCTCGCCTTTGCAGTTGGTTGCGCATCTGTTATATGCTGCCGTTCATCTCCAAAGCAAAAAGCACTTGTTACTCGACTAGTAAAGATTAAAACAGGTTGCACTACTCTAGCAATTGGTGATGGTGCAAATGACGTTGGAATGCTCCAAGAAGCAGATATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCTCAATTTCGGTATCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATTTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCATCACTCTATTCCTGTATGAGATTTATGCCTCATTCTCGGGGCAAGTTGCATACAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACTTCACTTCCTGTAATTGCCTTGGGAGTATTTGACCAAGATGTCTCTGCTAGATTATGTCTCGAGTTCCCATTATTATACCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGAAAAGGATTCTAGGTTGGGCATTCAATGGAGTAATGAGTGCTATCACAGTATTCTTCTTCTGCATTAATGCGATTGAGAATCAAGCATTCCGCAAAGGAGGCGAAGTAGTTGGACTCGAAGTTCTTGGTGCAACAATGTACACATGTGTTGTGTGTGTAGTGAATTGTCAAATGGCATTATCCATAACTTACTTCACTTACATACAACATTTATTCATTTGGGGTGGCATTCTTTTTTGGTATATTTTCCTCCTAATATATGGAACTATTAACCCTTTATTATCAACAACTGCTTATAAAGTCCTAATTGAAGCTTGTGCACCAGCACCATCTTACTGGCTCATAACTCTCCTTGTCCTTGTTGCTTCACTCCTTCCGTATCTTGTATACACTTCGATCCAATTGCGGTTCTTTCCTATGTTTAATCAAATGATACAGTGGAGAAGTAATGATGGACATGTAATTGATCCAGAATATGTTAATGTTGTGCGACAACGATCAATAGGACACATAACAGTTGGATTCACAGCTCGATTTGAAGCATCAAAGACTTCACGCAGTTGA 3387 0.3885 MGGGGGKIRKKRNQLSRIHAFSSGKTSFKGEHSLIGGPGFGRIVYCEEQETVSNVVPLVVVVAATVGKEAVEDWRRMKQDIEMNNRKVKVHKGEGVFDYSKWRDLKVGDIVKVEKDEFFPADLILLSSSYEDAICYVETMNLDGETNLKLKQALEETSKFQEDSTFRNFKAIIKCEDPNAYLYSFIGNIELEDQLYPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDSPSKRSKVEKRMDKIIYFLFSVLFFISFIGSIFFGISTSEDLENGVMKRWYLRPDDTTIYFNPKKAPIAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFVNHDVHMYYEETDQPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGRGVTEVERALARRKDLDGNVAEISEAKSSIKGFNFMDERIMNGNWVKEPHANVIQDFMRLLAVCHTAIPEVDEETGNVSYEAESPDESAFVIAAKQLGFEFYERTQTTISLREFNSIIGRTIRRSYKHLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGREFEAKTKQHINEYADAGLRTLILAYRELDEEEYDLFNKELMEAKSLVSADREQIVEEVLEKIEKDLILLGATAVEDKLQIGVPECIDKLAQAGIKLWILTGDKMETAINVGFACSLLRQGMKQIIISSDTPNIKSLEKVENNSAAAFAIKANVLSQLREGRELLAASNVKSEALALVIDGKSLTYALEDDVKDLFLAFAVGCASVICCRSSPKQKALVTRLVKIKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGITLFLYEIYASFSGQVAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLEFPLLYQEGVQNVLFSWKRILGWAFNGVMSAITVFFFCINAIENQAFRKGGEVVGLEVLGATMYTCVVCVVNCQMALSITYFTYIQHLFIWGGILFWYIFLLIYGTINPLLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYLVYTSIQLRFFPMFNQMIQWRSNDGHVIDPEYVNVVRQRSIGHITVGFTARFEASKTSRS 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02384 1128 CDD P-type_ATPase_APLT_Dnf-like 68 962 - -
Trre11g02384 1128 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1080 IPR023298 -
Trre11g02384 1128 NCBIfam HAD-IC family P-type ATPase 766 885 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre11g02384 1128 Gene3D - 59 234 - -
Trre11g02384 1128 FunFam Phospholipid-transporting ATPase 480 638 - -
Trre11g02384 1128 Pfam Phospholipid-translocating P-type ATPase C-terminal 830 1080 IPR032630 -
Trre11g02384 1128 Pfam Cation transport ATPase (P-type) 461 565 - -
Trre11g02384 1128 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 51 1091 - -
Trre11g02384 1128 ProSitePatterns E1-E2 ATPases phosphorylation site. 374 380 IPR018303 -
Trre11g02384 1128 SFLD p-type atpase 356 853 IPR044492 -
Trre11g02384 1128 Gene3D - 638 842 IPR023214 -
Trre11g02384 1128 FunFam Phospholipid-transporting ATPase 64 234 - -
Trre11g02384 1128 SUPERFAMILY Calcium ATPase, transduction domain A 89 232 IPR008250 -
Trre11g02384 1128 PRINTS P-type cation-transporting ATPase superfamily signature 802 821 - -
Trre11g02384 1128 PRINTS P-type cation-transporting ATPase superfamily signature 372 386 - -
Trre11g02384 1128 PRINTS P-type cation-transporting ATPase superfamily signature 688 698 - -
Trre11g02384 1128 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 437 640 IPR023299 GO:0000166
Trre11g02384 1128 NCBIfam phospholipid-translocating P-type ATPase 50 1087 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre11g02384 1128 Gene3D - 501 637 IPR023299 GO:0000166
Trre11g02384 1128 FunFam Phospholipid-transporting ATPase 638 842 - -
Trre11g02384 1128 SFLD Haloacid Dehalogenase 356 853 - -
Trre11g02384 1128 SUPERFAMILY HAD-like 367 857 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02384 Trre-Chr11 28394242 28401214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02384 1 1126 Primary Pumps ATPases AT1G68710 65.274 0.0 1642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02384 K01530 - gmx:100797039 1796.17