Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02337 ATGAGCAATCAGTACCTTGCAAATGTGGCATTGAAAATCAATGTTAAGGTTGGAGGTAGGAATACTGTTCTTGTCGATGCTCTTTCACGACGCATTCCACTAGTCAGTTACAGGCCTACAATTATTTTTGGAGCTGATGCAACTCATCCACACCCGGGAGATAATTCTAGTCCCTCAATATCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAATTACCAAGCATGCTAGTTTGGTTTGTGCCCAAGCACATCGGCAAGAGCTCATCCAGGATCTCTTTAAGCAATGGAAAGATGGTCCTAATTCTCAAGCACATCGGCAAGATTTCAAGATTCACTACATTGTCGGCTGA 351 0.433 MSNQYLANVALKINVKVGGRNTVLVDALSRRIPLVSYRPTIIFGADATHPHPGDNSSPSISAVVASQDWPEITKHASLVCAQAHRQELIQDLFKQWKDGPNSQAHRQDFKIHYIVG 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02337 116 Gene3D - 31 114 IPR036397 GO:0003676
Trre11g02337 116 Gene3D - 1 29 - -
Trre11g02337 116 ProSiteProfiles Piwi domain profile. 1 116 IPR003165 GO:0003676
Trre11g02337 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 97 - -
Trre11g02337 116 Pfam Piwi domain 3 92 IPR003165 GO:0003676
Trre11g02337 116 SUPERFAMILY Ribonuclease H-like 4 95 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02337 Trre-Chr11 27944695 27946087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02337 1 98 Eukaryotic Initiation Factors Gene Family AT1G48410 89.796 4.80e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02337 K11593 - ath:AT1G48410 182.185