Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02301 ATGGAATTTAATAATGGTAAAAAGACTCATAGCTGCACATTTAGAGAACTGAAGTTGGTTTCTTTTGTTGCTTTATGCCTCATTCTAATTTCTCCTGCTGAGGCATTTGATCCATTGGATCCAACTGGAAATGTGACAATAAGATGGGATATCATGTCTTGGACATCAGATGGTTATATGGCAACTGTAACATTATTTAACTTTCAACTATACCGAAATATTATGAGCCCGGGATGGACACTAGGATGGACATGGGCGAAAAAAGAAATCATATGGGCCATGATGGGAGCACAAGCTACAGAACAAGGAGACTGTGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTACCAGGAGCATCTTTCAATATGCAATACACAAATTGTTGCAAAGGTGGTGTGTTAACTTCTTGGGGACAAGATACATCAGGTGCAATCTCAGCATTTCAGATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACAGTGAAACTACCTCAGGATTTTAAATTGCTTGGACCGGGAGCCGGTTATTCGTGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACCGATGATCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACGTGTACTTATTCACAATTTCTTGCCTCCAAGAACCCTAGCTGTTGTGTTTCTTTGTCAACCTTCTACAATGACCAAGTCACAGCTTGCCCAACATGTGCTTGTGGTTGTCAAAATAATGCTACTTGTGTCACGAAAGATTCAAAGATATTGAAAGAGGCTGAGACTAATAAGACTAGGAAGGGTGATATTATGACACCAAAACCGTTATTACAATGTACACGCCACCTTTGTCCGGTTCGCGTGCATTGGCATATAAAAGACAACTATAAAGATTATTGGCGTGTAAAGATCGCAATCATCAACTTCAACTATAGAATGAATTACACACAATGGGGTCTTGTTGTTCAACACCCTAATCTTAATAATGTTACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATCAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATACTACAATGATCTATTAATGGAAGCTGGTGCTAAAGGGAATGTACAATCTGAGGTACTTATGAAGAAGGACAAGAATACCTTTTCACTCAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTCAATGGTGATGAATGTATGCTACCACCTCCTGATTCATATCCATTTTTGCCAAATTCTGCTCATAAGCTACCATCAAGTGTTGTAACAATGGTAGCCTATGTGATTTTTGCTTCATTTTTCATTTGGTTGTGA 1362 0.3913 MEFNNGKKTHSCTFRELKLVSFVALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMSPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDTSGAISAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKDSKILKEAETNKTRKGDIMTPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFNYRMNYTQWGLVVQHPNLNNVTQVYSFEYMPLLPYQAINDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFSLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSAHKLPSSVVTMVAYVIFASFFIWL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02301 453 PIRSF COBRA 9 453 IPR006918 GO:0010215|GO:0016020
Trre11g02301 453 PANTHER PROTEIN COBRA 23 443 IPR006918 GO:0010215|GO:0016020
Trre11g02301 453 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02301 Trre-Chr11 27414012 27416707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02301 19 447 COBRA Gene Family AT3G02210 58.430 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02301 - - gmx:100813134 820.461