Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02294 ATGTACAAGCCTCTAATGCCCTATGAGGGCTTAAATGATACAGGTGTAATGTGGGGAATAAAATACTTCAATGACATTCTTTCTTCAGCTGGACCACATGGGCATCTGCAGATATATTTCAACGGTGATTATTGCGTTATGCCTCCTCCCGATGTATATCCTTGGTTACCAAGTGCATCGTCAAAACTTTCTTTCTCTGAAGCAATATGGATCATTGCCATTCTTGAGGAGTTATTTTTGTAA 243 0.3951 MYKPLMPYEGLNDTGVMWGIKYFNDILSSAGPHGHLQIYFNGDYCVMPPPDVYPWLPSASSKLSFSEAIWIIAILEELFL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02294 80 PANTHER PROTEIN COBRA 2 37 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02294 Trre-Chr11 27367495 27367951 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02294 2 80 COBRA Gene Family AT3G02210 45.098 1.78e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02294 - - gmx:100811581 103.605