Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02293 ATGATAGGAAGCCAAGCAACAGAGCAAGGAGATTGCTCAAAATTCAATTCATTTAATCCACTTCCACATTCTTGCAAGAAGGACCCAACAATAGTTGATCTATTGTCAGGAGCACATTACAACCAGCAGCCGCACTGTTGCAGAGGTGGAATCTTGATTTCATTGGCTCAAGATCCAACCAATGAAATTGTTAGACCAACTAAATATTTGAGTAGTGATAAGAGAAGAACCACACAAGCTTTCATGACCTGA 252 0.4008 MIGSQATEQGDCSKFNSFNPLPHSCKKDPTIVDLLSGAHYNQQPHCCRGGILISLAQDPTNEIVRPTKYLSSDKRRTTQAFMT 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02293 83 MobiDBLite consensus disorder prediction 1 23 - -
Trre11g02293 83 Pfam COBRA-like protein 1 62 IPR006918 GO:0010215|GO:0016020
Trre11g02293 83 PANTHER PROTEIN COBRA 1 63 IPR006918 GO:0010215|GO:0016020
Trre11g02293 83 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02293 Trre-Chr11 27366228 27366683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02293 1 83 COBRA Gene Family AT5G60920 41.463 3.71e-24 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02293 - - gmx:100783820 98.2117