Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02200 ATGATGGAAGGTTGTTCTAGAGATGTGGAAGGTGAAGAAGAGGATTCAATGAAAGCATCATTCGGGGAAGATGTGGAAGGTGAAGAAAAGGATTCAATGAAAGCAGCATTGAGGGAAGGGATTAGTTTGGTTATCAATTCATGGTGGCTGATTCGAAGGTTTGTTCGCAGGGCCAGGGGAGACTATGGCCTTCAGCCCGAGCTAAAACTCAACGGCCTTTATGACTGCCTTTTTTCTTGTTTGATTCAATCCAATGACCTGCTTTCTGCAAAAATTGCACTCAAGGCACACCTTACTTCTTTCCTTGGAGATATTACTCCTCTTCCTGATAACAGCCTTCAAGAGGTCTGTGAGCAACTAGTGGCCATGTACCAAGAATGTTTACAAGGTGACTTAAGCTCTATTCAGATTATCAAGGAAGCCAATTCTTGGAAAAAAGCTAATAATAAATATGAAGTGGAAACCGACGACCCCTTTTTTGAGAGAAGAAGGAAGCAAGCCCTTATTACCGCACGAGATCGTGTATGGGAAGAAATGCTTTTTGAAGCGAGAATCAAGTATCTTAAGAAGATAAAGAAATTCAAGAAAGCTCGTCTTTTAATACGAGGGAGGAAACAAAAGATGGCAAGTAAGTTTCAAATGGAAACTCCCTCCTCTATCTCTATTCAGCTTACCCAGAAAGCCAACATTAGCTCTCCTCTAATGCACAAACAGGCTAATTCGTCTGAGATGGACGGTTTTAATCTTCCTAACTGGATCAGAGTGTTTAAAGAAGGGGTTGATTTGCTTATGAACAATTTGTGGCTCTACATCCCGTGTGGCTGTGGCTCTACATCCAAATCCAAATCCAGTCACTCCCTAATGATTCAACAACATGCTGATTACATCCTCTTTTGGAATGAATTGTGTTCTCTCCCTATCACCGTTGGTGCCGTTACTAATGACATCACTAAAGAGGTAGCTGAGAAACTCATGGTTATGTATGAGGAATGCTTAAAAGGTAATTTTACCTCTGTCAAGATACTCAGGGAGGAAAACCTGTGTTCGCCGAGCTGCTCAACCTCATGTAATGAAACTACAGCTTGCTTGGACCCAGACCAGTTCAGGGAGTTTAAACTTGTCAAGAAAGCACAGCTGAGCCATAATGTTGCAAAGTTCACTTTTGCACTCCCAACACCTACTTCTGTTTTGGGTCTTCCAATTGGACAACATATATGTTGCAGGGGTAAGGATGGTCAAGGTGGCGAGGTTATCAAATCATATACTCCTACAACTTTGGATTCCGATGTTGGACATTTTGAACTAGTTATCAAGAGGCTCCCTCAAGCAAGGATGTCATGCTATTTCCATGAGATGCGTGTTGGTGACTATCTTGCTGTTAAAGGACCAAAGGGACGTTTCAAGTACCAACCGGGTGAGGTTAGAGCATTTGGGATGCTAGCTGCAGGCTCTGGAATCACTCCAATGTTCCAAGTTGCTCGAGCTATATTAGAAAACCCAAATGACAAGACGAAGGTGCACCTTATCTATGCCAATGTTACATTTGAGGACATTCTCTTGAAGGAAGAACTTGATGGTCTTGCTACTAACTATCCAGACCGTTTTAAAATATACTATGTGTTGAATCAGGTTAGTTGCTATCGCGTGTAG 1650 0.4212 MMEGCSRDVEGEEEDSMKASFGEDVEGEEKDSMKAALREGISLVINSWWLIRRFVRRARGDYGLQPELKLNGLYDCLFSCLIQSNDLLSAKIALKAHLTSFLGDITPLPDNSLQEVCEQLVAMYQECLQGDLSSIQIIKEANSWKKANNKYEVETDDPFFERRRKQALITARDRVWEEMLFEARIKYLKKIKKFKKARLLIRGRKQKMASKFQMETPSSISIQLTQKANISSPLMHKQANSSEMDGFNLPNWIRVFKEGVDLLMNNLWLYIPCGCGSTSKSKSSHSLMIQQHADYILFWNELCSLPITVGAVTNDITKEVAEKLMVMYEECLKGNFTSVKILREENLCSPSCSTSCNETTACLDPDQFREFKLVKKAQLSHNVAKFTFALPTPTSVLGLPIGQHICCRGKDGQGGEVIKSYTPTTLDSDVGHFELVIKRLPQARMSCYFHEMRVGDYLAVKGPKGRFKYQPGEVRAFGMLAAGSGITPMFQVARAILENPNDKTKVHLIYANVTFEDILLKEELDGLATNYPDRFKIYYVLNQVSCYRV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02200 549 PANTHER NADH-CYTOCHROME B5 REDUCTASE 323 544 IPR001834 GO:0016491
Trre11g02200 549 FunFam NADH-cytochrome b5 reductase 460 547 - -
Trre11g02200 549 SUPERFAMILY Riboflavin synthase domain-like 362 471 IPR017938 -
Trre11g02200 549 MobiDBLite consensus disorder prediction 1 27 - -
Trre11g02200 549 Gene3D - 463 547 IPR039261 -
Trre11g02200 549 PRINTS Cytochrome B5 reductase signature 455 469 - -
Trre11g02200 549 PRINTS Cytochrome B5 reductase signature 478 497 - -
Trre11g02200 549 PRINTS Cytochrome B5 reductase signature 516 527 - -
Trre11g02200 549 PRINTS Cytochrome B5 reductase signature 397 408 - -
Trre11g02200 549 PRINTS Cytochrome B5 reductase signature 419 426 - -
Trre11g02200 549 FunFam NADH-cytochrome b5 reductase 361 460 - -
Trre11g02200 549 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 366 470 IPR017927 GO:0016491
Trre11g02200 549 Pfam Oxidoreductase FAD-binding domain 371 469 IPR008333 -
Trre11g02200 549 Pfam Oxidoreductase NAD-binding domain 479 542 IPR001433 GO:0016491
Trre11g02200 549 Gene3D Translation factors 360 462 - -
Trre11g02200 549 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 458 543 IPR039261 -
Trre11g02200 549 CDD cyt_b5_reduct_like 371 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02200 Trre-Chr11 25702583 25709365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02200 354 543 NADPH P450 reductases AT5G17770 80.526 3.36e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02200 K00326 - gmx:100805390 337.421